Clone FMO08970 Report

Search the DGRC for FMO08970

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:89
Well:70
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14658-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08970.5prime Sequence

425 bp (425 high quality bases) assembled on 2010-08-03

> FMO08970.5prime
CAGTCGACATGATTTCAAAGATCAAGATCTGGAGCCGCTCGCCACTGATT
CCGGCTAGGGATCACGGTTCAGCGATCCTTCCGCCGGCAGATCGGCCAGA
TCCCATTCCGGAGCTGTGCGAGGAAAGGCCGGTGATGGGTTGGCTGCTCG
GCTGGGAGTACGGGAGGAAGTGGCTGGAGAGGCGCGAGGAGATCCAGAGG
CACCGCAACATGGTCAGCAAGTTCGGCAGGATCCCGGCGGACTTCAGCTG
GTGGCTCAACCAGCGCAGGCCCCTCTATGTGCGCCAACAGCGATTCCGGA
GCAAGGCCGGACCTCGTGCCCGGAAACAGATAACGGCCTTCGAGATGGCC
AAGCGGAGGCGTGAGGAGCATAACCGCAAGCTATTGGAGAGCCAGCCCAA
AAACCAGGCAAGCTTTCTAGACCAT

FMO08970.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14658-RA 603 CG14658-RA 49..447 9..407 1965 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4830067..4830465 407..9 1965 99.5 Minus
Blast to na_te.dros performed on 2014-11-28 22:11:57 has no hits.

FMO08970.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:03 Download gff for FMO08970.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14658-RA 37..447 1..411 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:35 Download gff for FMO08970.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14658-RA 40..450 1..411 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:53 Download gff for FMO08970.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14658-RA 40..450 1..411 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:53 Download gff for FMO08970.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4830063..4830470 1..411 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:35 Download gff for FMO08970.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 655785..656192 1..411 98   Minus