FMO08972.5prime Sequence
1107 bp (878 high quality bases) assembled on 2010-08-03
> FMO08972.5prime
CAATCGACATGTGGGCTCCTCTGCTCGCTTTCGTTATCCTTGGGCTAAAC
TATGCAGCATCCTCGTTCGTGAACTGGGATAATGTATTTTACGAGCAGCA
TGCGACGTATCTGCGTCCTGGTGAGCCCCACATCCAGGAAGGACAGACGC
TGCTTAACATGCTGTACGTGAACAACCAGGTCCAGGTCTACTGCCACCCG
CCAACAGCGTTCTCCATGTGGAATGTCTTCCAGAGCAACCGCCTGCGCCT
GCAGATAGCCGCTGGCGAAGATTACACTCAGTATAAAGGAGCCACCGTGC
GGGAAGTTCATCATGCGCATAGCCAGCTGGATGAGTGCCACGAAGGAAAG
CCCTTGGGGCATTCCGCATCATACGAGCCACGGATCGTTCCGATGGCCAC
GTATGAGCACTCCTGTTACGGCATCTACACATCCAAACCGTTCGTCCTCA
CGCTTGAAGTGATCAGTTTCGACCTTGAGCGGGTAAGCCAGTTCACCTTT
GGCATCGTTTTATGGTTAAGCTGTCCGCTCCTGGCGGATTCACTGCTTTT
CTTCTACTGCTCAGCTGCGGCCCTGGGCGCCCACCTGGCGGGTTTGTTGG
CGGTCGCAGCCACCCTAATGGCATCTGATGGCGAGCGGTACCTGCGACTC
GGAACGCTCAAGGTGAACTTCAAGCTGGTGCTAAACGAGCGGCCCACCGT
GATAACCTTGGCGCTGGTCAGTGGCGCCTGGTTGCTGAAGTCCGCCTCCC
AGCGCTGCAGCTTTTTGTGGCGGTGCACTCTGTTTCGCCGCCTGCATCAC
CGCTTGCTGAAAGGCACCTCCTACTTGCTGATCTCACTGCATCCGATACA
GGGGCTTTGGGATGACCTGCCTTATGCTGTTGATGCCCTGCCCGGAATTT
TTAACTGTAATACGCTGGCTCAAAACCCTATACGCTTGCTACAAAGGGGC
TCCGTTAAACCCGAGGGTCCAGGTGGAAATCAAAATCAGGACTTCCCTTT
ATCAAATCATATCTTCGGAATCGATGCGATCGAAATACAAAATCGATCAC
CGAAAGATGGATTTATACAGAAATTTGACCAAACAATAACTAACTAGGGT
CTTTTAT
FMO08972.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14006-RB | 2397 | CG14006-RB | 60..1111 | 9..1056 | 4725 | 97.3 | Plus |
| CG14006-RA | 1591 | CG14006-RA | 60..1111 | 9..1056 | 4725 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5727759..5728752 | 999..9 | 4530 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:28:36 has no hits.
FMO08972.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:23:01 Download gff for
FMO08972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14006-RA | 54..1091 | 1..1038 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:14 Download gff for
FMO08972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14006-RA | 54..1091 | 1..1038 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:27 Download gff for
FMO08972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14006-RA | 54..1091 | 1..1038 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:27 Download gff for
FMO08972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5727762..5728758 | 1..996 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:14 Download gff for
FMO08972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5727762..5728758 | 1..996 | 97 | | Minus |
