FMO08973.5prime Sequence
995 bp (19 high quality bases) assembled on 2010-08-03
> FMO08973.5prime
CAATCCACATGGGGAATGGCATGAACAAGGTCTTGCCGGGACTTTATGTG
GGCAACTATCGCGACTCCAAGGATCACGCTCAGCTGGAAAGATTCCGGAT
CTCTCACATCATCGCCATACCTGACAGTCCTCGGCGTTTGCTGCCGGACA
ATCACTACCTGTGCGTGATGGCCTCGGATACCCCGTACCTTATTCTCTCC
CAATACTTTTCCGTCTGCAACGACTTCATACACGCCGCCCGGCTTCGCGA
AGGCAACGTACTCATCCACTGCCTGGCGGGGATGTCTCGCTCGGTGACCG
TGGCCGTGGCCTATATCATGACGGCCACCCACCTGAACTGGAAGGAGGCA
CTTGGGGTGGTTCGAGCTGGTCGCGCTGTATCCAATCCTAATGCTGGATT
CCAAAGCCAACTGCAGGAGTTTGAGCAGTTTAAGCTGTCCTAGGAACGCC
GCCGCTTGAGGGAACGCTTCCCATCCTCGGCTCTGGAGCATCTGGATCGC
ACTAAGGTGGCCACCGCTCTGGACAACTACCAAGAGTTGCTGCAAACCGC
GACATCTGCCAGGGTAACTGCTCCCACGGCTAAAAATGTCCTACAGGTGC
GGACCAACACGTACATGGTGTTAATATTGGTCAGGGGGAGGAAGAAGACG
AGGGTGAAGGCGAGGGCTTGTGCAAAGTCATGCGAAGCTTGTCTTACACT
CTAAACTTTGCGGTGGACCAATGGAAGAGCAGTACCATTAAAAGGATCCG
AACATTGACCCCCCACCGGATTTTAGCTTGGGCAAAGACCTTATGCCAAG
TGTGCGTTACTACCATCCGGAGTGCGACAAGGGTCATTTGTTAAGAATGT
GGATTCGGACAATGATGACAACAGTATATTGCTTTCACGACCTCACGAAG
CTAGAAACTAAGTCCAGTAAAATTAAAAAACGACGTGTACCAAATCGGAA
TCATGCACCCAAGTTGTCTAGACAGCCAGCAAGCTTTCTTGACCA
FMO08973.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10089-RA | 1569 | CG10089-RA | 555..1519 | 7..962 | 4000 | 94.9 | Plus |
| CG10089-RB | 1518 | CG10089-RB | 504..1468 | 7..962 | 4000 | 94.9 | Plus |
| CG10089-RC | 1070 | CG10089-RC | 76..1020 | 27..962 | 3900 | 94.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13468070..13468895 | 962..146 | 3165 | 94.2 | Minus |
| 3L | 28110227 | 3L | 13468952..13469072 | 147..27 | 530 | 95.9 | Minus |
Blast to na_te.dros performed 2014-11-28 22:18:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 3561..3610 | 122..73 | 115 | 70 | Minus |
FMO08973.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:46 Download gff for
FMO08973.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10089-RA | 305..1283 | 1..969 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:19 Download gff for
FMO08973.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10089-RB | 254..1232 | 1..969 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:35 Download gff for
FMO08973.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10089-RB | 498..1476 | 1..969 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:35 Download gff for
FMO08973.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13468062..13468894 | 147..969 | 94 | <- | Minus |
| 3L | 13468953..13469069 | 30..146 | 95 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:19 Download gff for
FMO08973.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13461162..13461994 | 147..969 | 94 | <- | Minus |
| arm_3L | 13462053..13462169 | 30..146 | 95 | <- | Minus |
