FMO08977.5prime Sequence
1159 bp (1049 high quality bases) assembled on 2010-08-03
> FMO08977.5prime
CAGTCGACATGGAGTACGAGAAAATGTTGTACATGCCAGCAGCCAGTGAG
ATGCCTCACAGTCCGCAGCTGAAGCCACATCAGTTCCAGGCCCACACGCC
GACGGATCAGTACTCATCCTATGCGGACAACTTCGACCTGTCGCTGCTGC
CGCAGGAGTCCGCATCCATTCCCACCACAGTCTTCCAGTACAACGCCCCC
CAGATCAAGGTCGAGTGCGCCTGGGATAGCCAGCCCATCCAGCAGCAACA
GCAGCCCACTGCGCCCTATACCAACCCCTCCAGCCACCAGCTGATTCCTC
CGCCCGCCTATCCCCACAGTGCCTATCCCTCTCCGCAATCCAGTCCGCTG
CAGTCGGAGTTCGCTGCCTATGGGCTTGGCAGATTTGGCGGTAGCTACGA
CAGTCTGAACAGCCCATCGCCCTCGCTGGAGGCGGTTAGCATCAAGCAGG
AGCTGCACATCCTGCCACCCTCTCCGCCGGAGTCCAACTGCGAGACGCCA
TCACCCAGATCCTCCTGCGGGGAGAGCATCAAGGCCGAGCCCTTGGATGC
GGACATCGAGAGCCTCATCGATCTGAACTCTCTGCTGCAGCAGCAGAGTC
TACAAAGCCCACAGAATCTGCAGGACACCAAGCCCGATCACCAGCTACTG
CGGGAGTGCCTCGAAGACACCAGCTTCCAGAAGCGCCACAATCTGAAGCC
TCTGGCTCTGGAATCCTTCATCGGAGGCTTGGCCGAAGTGCGCGGCGACT
TTGAGCCCGTCATTTCACTGGCCCTAGAGCATGCCAAACGAGAGGCGGAC
GCCATCTGCGCGGAGCTGCAAATATCGCACGATCCCAATGGCTGGTCGCC
CGCCCAGGTACACGCATGGCTCCGATCCACCTTGGCCCAGTTCAGATTGC
CGCCGGTGGCCGATTTGGAGCTGCACTTCTGCGAAACGGAGCCGCACTGG
CATTACTCAGCGAGGAGAATTCGTGCGCCGACTACCAGAGAGCGCAGCAC
GCTGCACGCCCAGTTGGAAATTTGAGATGGCTACGCGACAGCCGCTCATC
AGCAGCATTCCAGCAGTCTGCGAGCACTGATCACTGCAGCAGCTATGCAA
TGCCCCATTGGACTTGAACTAACGAAGACCGGAGAATGACAGACGAATGG
AGGCAATGC
FMO08977.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets98B-RA | 3402 | CG5583-RA | 555..1681 | 9..1121 | 5245 | 98.4 | Plus |
| Ets98B-RB | 2377 | CG5583-RB | 119..1205 | 49..1121 | 5045 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27743749..27744529 | 49..829 | 3905 | 100 | Plus |
| 3R | 32079331 | 3R | 27744591..27744752 | 831..990 | 710 | 98.8 | Plus |
| 3R | 32079331 | 3R | 27737092..27737133 | 9..50 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:21:48 has no hits.
FMO08977.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:44 Download gff for
FMO08977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets98B-RA | 543..1682 | 1..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:08 Download gff for
FMO08977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets98B-RA | 545..1684 | 1..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:02 Download gff for
FMO08977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets98B-RA | 545..1684 | 1..1126 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:02 Download gff for
FMO08977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27737082..27737128 | 1..45 | 91 | -> | Plus |
| 3R | 27743751..27744531 | 46..831 | 99 | -> | Plus |
| 3R | 27744592..27744752 | 832..990 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:08 Download gff for
FMO08977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23570314..23570474 | 832..990 | 98 | -> | Plus |
| arm_3R | 23562804..23562850 | 1..45 | 91 | -> | Plus |
| arm_3R | 23569473..23570253 | 46..831 | 99 | -> | Plus |
