FMO08980.5prime Sequence
824 bp (824 high quality bases) assembled on 2010-08-03
> FMO08980.5prime
CAGTCGACATGACCATCACCAACTGGTTTAATTGGTCCGTAAAGGATTTA
AGCAATGAGTCCCATGCGAGACCCAAGTTGATTCCGGGATTCGACCAGTT
GGATAAGAGGCTGCAGGCGGCGCTTCAGGAGCGGGACGTGCAAAAGCATC
AGCGCAAGCGTACACAGGCGGGTGGTGGCCAAAGCCAGGCAAAGCCCAAA
AAGCTCAAGACGACCAGAAAACAGACACCAAGGGTATGCAAATTCCAGAA
GGTTTACACTGAGAAACGCAAGAAGCTAAAACGAGAGGCCAACATGCAAA
GTAATGCGTTTCAGTTCCGGAGCAGACCTGTGCCCGATTTCGAGCGATCT
CATCGTCGTTTGGAAAGGCGCAAGCTGTACCTGAACTCTCTGCAAACGGT
GACGAAGCCCCGATGCCCTGCCACGCTGGCCACGTCAATGGTCGCTTTAA
ACAAGCGCCTAAAGAAGCAAAGGCAGAGCCGAAAGACATCCGACTTTGTG
CCCCGAATCAATCCAGGCTCTTCTATGGACTACCTCAACCGGCAGCCCTT
TACGCCGCTTGTCAAGTCCTCCTTTACCCATCCAAAACCTTTTCATCTCC
ATACGTCGGAGCGTGCTCTGCGCCGCCAAGTGTATGACGAGAGGAAAAGG
ATACGGATGGATCGGCGTTTGGAGCAGCAGACCATCGATTGGTTTGCACG
GGAAAGAAGCGAGTACTTTAAGCTACGCAAAATGACAAATTTCAAGGCTA
CGCCGAATCCCTGGAAGCAAACAAGGGTCACCGCTAGAAAAGATTCTCAC
GCAGCCGCAAGCTTTCTAGACCAT
FMO08980.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5781-RA | 898 | CG5781-RA | 53..850 | 9..806 | 3975 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12696474..12697271 | 806..9 | 3975 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:08:14 has no hits.
FMO08980.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:40 Download gff for
FMO08980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5781-RA | 504..1301 | 9..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:33 Download gff for
FMO08980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5781-RA | 53..850 | 9..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:23 Download gff for
FMO08980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5781-RA | 53..850 | 9..806 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:23 Download gff for
FMO08980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12696474..12697271 | 9..806 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:33 Download gff for
FMO08980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12696474..12697271 | 9..806 | 99 | | Minus |
