FMO08983.5prime Sequence
1143 bp (1041 high quality bases) assembled on 2010-08-03
> FMO08983.5prime
CAGTCGACATGTCAAAGCGCTGCTGGAACCGCAACCAGCGCTCGGTGTCC
CTGCCCAGGAGCGAATTCGTCGAAATAAACCCCATGATGCCCGGCAGGAG
CACCGCAGCTGAAGGCGCACGCGGGAGAGCATCATCCGGACCTCGGATGA
CCGTGGAGACCCTGTTCCATACTTCTCACTCGGCGAAGAAGGAGCGTCCA
CAGCAGGGTGCAAAACCCATGGAAAACCGAGTTTTGAAGGAAAGCTCCAC
GTCTAAGAATTCGCGTGAGATGCCTTCTCTGCTACTCTCCACCAAGGGCA
GGCCAGATGGCACTTGGAATAATATGAGAGCCAAGGAAAACAAGCAGCAT
CGCAAAGAAGGGAGTCGCCACCTGGCTGCAACTTCCACGATGCCCAAGAT
GGATGAGCTTGGACCCGACTGGCGAAAACCTTGGCCGATCGGCGGTTTTT
CTCGGAATAATCGTAGTAGCCCTCAGATGTTCAGTACAGTTCCTTCGAAA
AGTTCTGTTAACATTTCAAGAGACAACAACAATTATCCCGATTTAAAAAT
AGAAGACACTGGGAAAAAGAGCCACACAGTCACAGGAAAGGCACCGAACA
CGCGTGCAGAAGATCAAAGGTCAGGAATGGTGGCCCATCTAAGCGGTCTA
AATAGCAAGACTAAGCACACGAGGCTGATGAGTACTTCCAAGCGCTGCAA
AGCAGGTTCGGAAGATTCTGTTTACCATCAGACCCTGAATGATGTCATCT
CCCAGTGGGATTGCCAGCCGTCGACCAGTAAAAGTAATCCATGCCAGATT
CCGAAGATTCCGAATCTGCCGTCCGGGATGGACAGCTTCGCCGAGCAAAG
ACGCGGACTTCTCTTTCATGGCGGATCTGGAAAATAGGATGGGGGTCGAA
AGTCTGATGCCCGAGCTGCTGACTCCATCGCGCACCTCCCAGCCGCTGAC
AAGAATTCTCGCCTTGGGACTTGTATGCCTTGATGGGCACGACGACAATT
TCCGCTTAGCATCTGCACGATGAGAGATCCAAAATGATCCATTGTGGGGC
TCCACTGCATTACTGGGACGAGCACGGCAGACTGACTTGACCACGTCTGC
GAGAGGGCCTTGGAAATTTCCCAGGCCCCATTCTTGGCTTCAC
FMO08983.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13577-RB | 1744 | CG13577-RB | 88..1223 | 9..1128 | 5220 | 98.2 | Plus |
| CG13577-RC | 906 | CG13577-RC | 1..662 | 483..1128 | 2850 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24267981..24269031 | 1056..11 | 4895 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:39:52 has no hits.
FMO08983.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:47 Download gff for
FMO08983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13577-RB | 68..1211 | 1..1134 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:48 Download gff for
FMO08983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13577-RB | 84..1227 | 1..1134 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:17 Download gff for
FMO08983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13577-RB | 84..1227 | 1..1134 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:17 Download gff for
FMO08983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24267894..24269036 | 1..1134 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:48 Download gff for
FMO08983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20155417..20156559 | 1..1134 | 97 | | Minus |
