FMO08987.5prime Sequence
485 bp (20 high quality bases) assembled on 2010-08-03
> FMO08987.5prime
CAATCCACATGGCTGCCACTCGTCGTCTGACACGGGAACTCTCCGATCTG
GTTGAGGCCAAGATGAGCACTCTGCGCAACATCGAGAGTAGCGATGAGTC
CCTGCTGATGTGGACGGGTCTTTTGGTTCCGGAAAAGGCGCCCTACAACA
AGGGCGCCTTCCGCATCGAAATCAACTTCCCGCCCCAGTATCCCTTTATG
CCACCAAAGATCCTATTCAAGACCAAAATCTATCACCCCAACGTGGATGA
GAAGGGGGAGGTGTGCCTGCCCATCATCACCACAGACAACTGGAAGCCCA
CAACGCGCACAGAGCAGGTGCTCCAGGCCCTGGTAGCCATCGTCCACAAC
CCGGAGCCAGAACATCCGCTTCTTTCTGACCTGTCCGAGGAGTTCGTAAG
GGAGCTCACGAAGTTCATGAAGACGGACGAAGAGTTCACCAAGAAGAATG
CGGAGAAGCGACCAGAGGCAAGCTTTCTAGACCAT
FMO08987.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ubc84D-RA | 637 | CG12799-RA | 99..557 | 9..467 | 2190 | 98.5 | Plus |
Ubc10-RA | 999 | CG5788-RA | 401..746 | 101..446 | 365 | 74.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7518900..7519358 | 467..9 | 2190 | 98.5 | Minus |
2R | 25286936 | 2R | 17788665..17789010 | 446..101 | 365 | 73.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:58:34 has no hits.
FMO08987.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:33 Download gff for
FMO08987.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ubc84D-RA | 1..462 | 9..470 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:39 Download gff for
FMO08987.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ubc84D-RA | 94..562 | 3..472 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:44 Download gff for
FMO08987.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ubc84D-RA | 94..562 | 3..472 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:44 Download gff for
FMO08987.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7518895..7519363 | 3..472 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:39 Download gff for
FMO08987.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3344617..3345085 | 3..472 | 97 | | Minus |