FMO08992.5prime Sequence
467 bp (467 high quality bases) assembled on 2010-08-03
> FMO08992.5prime
CAGTCGACATGGCAGCTTATACCGAGGATGAGTAGGCTGAATTCCAGGAG
GCCTTCAACCTGTTCGACAACCGCGGAGATGGCAAAATTCAGCTGAGCCA
GGTGGGCGAGTGCCTGAGGGCCCTGGGCCAGAACCCCACCGAGTCGGATG
TGAAGAAGTGCACCCACCAGCTGAAGCCCGACGAGCGCATCTCGTTCGAG
GTGTTCCTGCCCATCTATCAGGCGATCTCCAAGGCCCGCTCGGGCGATAC
GGCTGATGATTTCATCGAAGGACTGCGTCACTTCGACAAGGACGCCAGCG
GTTATATCTCCTCCGCCGAGCTGCGCCACCTGCTGACCACGCTGGGCGAG
AAGCTCACCGACGAGGAGGTCGAGCAGCTGCTGGCCAACATGGAGGACCA
GCAGGGCAACATCAACTACGAGGAGTTCGTGCGCATGGTCATGAGCGGTG
CAAGCTTTCTAGACCAT
FMO08992.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mlc-c-RA | 1302 | CG3201-RA | 116..561 | 4..449 | 2155 | 98.9 | Plus |
| Mlc-c-RB | 1248 | CG3201-RB | 97..507 | 39..449 | 2025 | 99.5 | Plus |
| Cam-RD | 3406 | CG8472-RD | 406..497 | 282..373 | 190 | 80.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5619877..5620287 | 449..39 | 2025 | 99.5 | Minus |
| 2R | 25286936 | 2R | 12269291..12269382 | 282..373 | 190 | 80.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:58:23 has no hits.
FMO08992.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 15:22:26 Download gff for
FMO08992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc-c-RA | 131..580 | 1..449 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:32 Download gff for
FMO08992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc-c-RA | 112..561 | 1..449 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:38 Download gff for
FMO08992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc-c-RA | 112..561 | 1..449 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:38 Download gff for
FMO08992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5619877..5620286 | 40..449 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:32 Download gff for
FMO08992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5513910..5514319 | 40..449 | 99 | <- | Minus |
