FMO09006.5prime Sequence
170 bp (170 high quality bases) assembled on 2010-08-09
> FMO09006.5prime
CAGTCGACATGAAGACACCGGACACCAAAGCCAAGTTGCTGAATAATATA
AGTCTATCTAAACACCTGTCTTCCAAGAAAGGCGGCTCTCGCACTAGTAA
CTGCGGCAATTGTCTGGAATTCTCCGTACTCACGCGTCTCTCCAGCGTGC
CCGCAAGCTTTCTAGACCAT
FMO09006.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:38:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42305-RC | 1018 | CG42305-RC | 453..596 | 9..152 | 720 | 100 | Plus |
CG42305-RB | 779 | CG42305-RB | 92..235 | 9..152 | 720 | 100 | Plus |
CG42305-RA | 657 | CG42305-RA | 92..235 | 9..152 | 720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:38:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18813296..18813397 | 51..152 | 510 | 100 | Plus |
2L | 23513712 | 2L | 18813100..18813143 | 9..52 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:38:05 has no hits.
FMO09006.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-17 15:36:25 Download gff for
FMO09006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17325-RA | 85..238 | 1..156 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:39 Download gff for
FMO09006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42305-RB | 86..239 | 1..156 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:09:24 Download gff for
FMO09006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42305-RA | 86..239 | 1..156 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:09:24 Download gff for
FMO09006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18813094..18813143 | 1..52 | 92 | -> | Plus |
2L | 18813298..18813401 | 53..156 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:39 Download gff for
FMO09006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18813094..18813143 | 1..52 | 92 | -> | Plus |
arm_2L | 18813298..18813401 | 53..156 | 98 | | Plus |