Clone FMO09028 Report

Search the DGRC for FMO09028

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:90
Well:28
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14770-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09028.5prime Sequence

479 bp (479 high quality bases) assembled on 2010-08-09

> FMO09028.5prime
CAGTCGACATGCTCAAGTTGGCTATTACCTGCCTGGCCCTTCTGGCCGTT
AGTGGAGCTCTGAAGATCCACGACTACCACCAGGGGCACGAGGAGTACGA
GCACCACGACCATCATGAGCACCACGAGCCGGAGCACCATGTGAAGTACG
AGCCGGAGCACGAGGAGACGGAGCTGCACCACGAGGTGGACCACAAGCAC
GCCACCTCGCACCAGAGCGTCAAGTTCCACCACTACCATGCCGTGCCCGT
CTACATCAAGAAGGAGGACCAGCACCTGGTGAAAAAGCCTATCGAGATCG
GCGGCACCAAGCAGAAGCTGAAGATCCTGCACCCGAAGAGTGAGCACAAC
CACAACCACGGACTGGTGCTCGAAAACCACAGCGAGTCGCACCACGAGCA
CGGCCACTACGAGGAGCCGGTGCACCACTCGGAGCACTACGAGCACTACT
CGCACCACGAGGCAAGCTTTCTAGACCAT

FMO09028.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14770-RA 690 CG14770-RA 111..564 8..461 2270 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1369613..1370050 24..461 2190 100 Plus
Blast to na_te.dros performed 2014-11-28 19:59:24
Subject Length Description Subject Range Query Range Score Percent Strand
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 850..959 260..366 111 57.3 Plus

FMO09028.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-17 15:36:18 Download gff for FMO09028.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14770-RA 1..456 9..462 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:31 Download gff for FMO09028.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14770-RA 74..543 1..469 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:51 Download gff for FMO09028.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14770-RA 103..572 1..469 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:51 Download gff for FMO09028.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1369613..1370058 24..469 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:31 Download gff for FMO09028.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1263646..1264091 24..469 99   Plus