FMO09029.5prime Sequence
515 bp (515 high quality bases) assembled on 2010-08-09
> FMO09029.5prime
CAGTCGACATGATGCGGAGATCACAGATCGGTTTGCTCAGCAGGCTGCTG
CTGTTGCTGCTGGTGGTGGAACTGACGCCCCCTGCTATTCCGGTGCCCAT
GCGATCCTCACCCCAATCGCTGGCCCTACTGCGAGCACGGGATCAGTGCG
GCAGGGAGCTGACTGCTGCCCAGCGTCTGCAGCTGGACAGGATGCAATTC
GAGGATGCTGCCCATGTGCGTCACTATCTCCATTGCTTCTGGTCACGGCT
GCAGCTCTGGCTGGATGAGACCGGATTCCAGGCACAGCGCATCGTTCAGA
GTTTCGGCGGCGAGAGGCGTCTCAATGTGGAGCAGGCACTGCCAGCCATC
AACGGGTGCAATGCGAAAACGAGCTCCAGAGGATCGGGCGCTCAGACAGT
GGTCGACTGGTGTTTCCGTGCCTTTGTCTGCGTGCTGGCCACTCCAGTCG
GTGAGTGGTACAAGCGCCACATGTCCGATGTCATCAATGGGAATGCCGCA
AGCTTTCTAGACCAT
FMO09029.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp8a-RA | 597 | CG12665-RA | 21..509 | 9..497 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9215158..9215611 | 44..497 | 2270 | 100 | Plus |
| X | 23542271 | X | 9214896..9214931 | 9..44 | 180 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:40:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1097..1145 | 93..44 | 121 | 74 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6774..6818 | 89..44 | 119 | 76.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1557..1594 | 74..37 | 109 | 76.3 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 149..173 | 68..44 | 107 | 92 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9179..9203 | 68..44 | 107 | 92 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6712..6743 | 75..44 | 106 | 81.2 | Minus |
FMO09029.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-17 15:36:18 Download gff for
FMO09029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp8a-RA | 1..489 | 9..497 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:49 Download gff for
FMO09029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp8a-RA | 13..509 | 1..497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:41 Download gff for
FMO09029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp8a-RA | 13..509 | 1..497 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:41 Download gff for
FMO09029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9214888..9214931 | 1..44 | 91 | -> | Plus |
| X | 9215159..9215611 | 45..497 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:49 Download gff for
FMO09029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9109192..9109644 | 45..497 | 100 | | Plus |
| arm_X | 9108921..9108964 | 1..44 | 91 | -> | Plus |
