FMO09040.5prime Sequence
263 bp (263 high quality bases) assembled on 2010-08-09
> FMO09040.5prime
CAGTCGACATGTCCCTGGTTTCAGATGAGGAGTGGGTGGAGTACAAGTCC
AAGTTCGACAAGAACTACGAGGCAGAGGAGGATCTGATGCGTCGTAGAAT
CTACGCCGAGTCCAAAGCCCGGATTGAGGAACACAATCGGAAGTTCGAGA
AGGGCGAAGTGACTTGGAAAATGGGAATTAATCATTTGGCTGATCTCACG
CCTGAGGAATTTGCCCAGCGTTGTGGCAAAAAGGTGCCGCCAAATGCAAG
CTTTCTAGACCAT
FMO09040.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cer-RA | 497 | CG10460-RA | 111..347 | 9..245 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19396365..19396564 | 245..46 | 1000 | 100 | Minus |
| 2R | 25286936 | 2R | 19396624..19396662 | 47..9 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:35:16 has no hits.
FMO09040.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-17 15:36:13 Download gff for
FMO09040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cer-RA | 91..338 | 1..249 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:40 Download gff for
FMO09040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cer-RA | 103..350 | 1..249 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:03 Download gff for
FMO09040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cer-RA | 103..350 | 1..249 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:03 Download gff for
FMO09040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19396362..19396562 | 48..249 | 99 | <- | Minus |
| 2R | 19396624..19396668 | 1..47 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:40 Download gff for
FMO09040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15283867..15284067 | 48..249 | 99 | <- | Minus |
| arm_2R | 15284129..15284173 | 1..47 | 91 | | Minus |
