FMO09049.5prime Sequence
1123 bp (921 high quality bases) assembled on 2010-08-09
> FMO09049.5prime
CAGTCGACATGGGTCATAAAATGGGTGGCTTCTTGGAAAAACCAGAAACT
GAAAAGCAGGCTCAAGAGGGTCATGGGAATGGGCTGCGATACTGCGTAAG
TTCTATGCAAGGTTGGCGATTGGAAATGGAGGATAGCCACTCGGCTGCTT
GCCGGCTGAAGGATCCCTTCGCAACGTGGTCATATTTTGCGGTGTTCGAT
GGTCACGCTGGCAGTCAAATATCACTGCATTGCGCTGAACATCTAATGAG
TACTATATTGGAATCCGAATCTTTTTCGAAGCACAAATACGAGGCTGGCA
TACGAGAGGGCTTCCTGCAGTTGGATGAGGATATGAGGAAGCTGTATCAC
GACCAGCAAGGCGGCTCGACGGCCATTTGTGTTTTTGTATCACCGGACAA
AATATATCTGGTCAATTGTGGTGACTCGCGTGCAGTGATATCGCGAAATG
GAGCAGCTGTCATCAGTACAATTGATCACAAGCCGTTTTCTCCCAAAGAA
CAAGAACGCATTCAAAATGCCGGAGGCAGTGTAATGATTAAAAGGATAAA
TGGCACTCTGGCAGTTTCCCGGGCCTTCGGTGACTATGATTTCAAGAATG
ATGGCTCTAAGTCTCCTGTCGATCAGATGGTGTCTCCGGAACCTGATATA
ATAGTTTGCAATCGGTCCGAACACGATGAATTCATAGTTGTAGCCTGCGA
TGGCATTTGGGATGTGATGACTAGCAGCGAGGTTTGTGAATTTATTAGGT
CACGGCTTTTTGGTGACCTATGACCTGCCGATGATTGTTAACAGCGTATT
GGATATTTGCCTGCATAAGGGCAGCAGGGACAATATGACACTGCTCCTCC
TACTTTTGCCTGGAGCACCAAAGGTCTGATATGGATGCAGTTAATGCCGA
AAGGAGTCTGATTAAACTTATGTTCCAATTAACAAGAAGTGATTTGAGAG
CAGGAATTACACGACTTTGAAATACTTATCGACTGAATGAAAAGAATGGC
CAATAACATCCAAATCTACCACCTGGCCGGTGGTCTTTATGCAAATATTA
CTTATAGAGGCAGCTTTCCAGAAAAATATCAGAAAATCTCGGCTTGAATT
ATTTGATTACTTTTTCACTGTGC
FMO09049.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6036-RA | 1184 | CG6036-RA | 28..1135 | 9..1114 | 4830 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26344383..26345446 | 1070..9 | 4540 | 97.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:27:59 has no hits.
FMO09049.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-17 15:36:08 Download gff for
FMO09049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6036-RA | 13..1094 | 1..1080 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:23 Download gff for
FMO09049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6036-RA | 21..1102 | 1..1080 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:50 Download gff for
FMO09049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6036-RA | 21..1102 | 1..1080 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:50 Download gff for
FMO09049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26344391..26345451 | 1..1063 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:23 Download gff for
FMO09049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22170113..22171173 | 1..1063 | 97 | | Minus |
