FMO09067.5prime Sequence
1128 bp (993 high quality bases) assembled on 2010-08-09
> FMO09067.5prime
CAGTCGACATGAACTACAATCCAAATCCGGCCTCAGCTGCCGGTCGCCCA
AGGCCGCCGAAGCGTGTGAGTGATGTTAACGCCATGGGACCCTCGGCTCC
GATGATGGGCGGTGGCGCCACCTTCATGGCCCCGCCCACCGGCCCCGGAA
TACTAGATCCCAATATGTACGGAGCACCTGCTCCGGCCCCGGTCAACAGC
TATGGCTTCGACCCCAATCTCGGCCAGCCCTCGCAGCACATTCAGCAGCC
ACCACAACAGCAGCCCGGATACGGATATGGAGCACCACCTCCCCAACAGG
CGGCTGGGCCACCCACCTACGGAATAGGAGCACCTCAGCCTGTAGCTCCA
CCCACTGGACAGTACCCACAGTTCGCCATGTTCCAGCAGCCCATCGTGCA
AGACATGGCTATGCAGTACGGTCAGAAACTAGCGGATCAGGGCAAGCAGA
TCATGGAGAATCAGTTCGAGAAGTGGGTGCCCGTAGCCAAGCTCAAGTAC
TACTTCGCAGTGGACAACGCCTACGTGGGCAGGAAGTTGCGCCTTCTGTT
TTTCCCCTATATGCATAAGGATTGGTCCCTGCGCTACGACCAAGAGCACC
CAGTGCAACCACGATATGATGTTAATGCGCCAGATCTCTATCTGCCCACC
ATGGGCTACATCACATACGTGATCGTAGCGGGTTTGCTTCTGGGCATGCA
GAAGCGATTTTCGCCGGAGCAGCTCGGCATTCAGGCCTCCAGCGCCATGG
CATATAGCATTTTCGAATTGGTCATTTACTCCCTAGCCCTGTACGTAATG
AATGTGAAGACGAGCCTGAAAACGCTTGATCTGCTGGCATTCACTGGTTA
TAAGTACGTTAATATAGTTGTCTGCCTGATGGTTAGCACGCTGTTCTTTA
AGTCTGGATATTATATAGCACTGACGTATACCAGTTTCTCCATCGTTTCT
TCATGCTCGCACGTTGCGGACGAGACTGCTGCAGACACCTCCCCCGCTGT
CGCCAGTGGATCATCACTACGATCGTATTGTCATTCACAGCATTGACTAC
AGCGCAGCAAAGCGCAAACTCTCTCTGGTCATGATCGTCCGGAAAGGCCT
GTTTCGCTTTCTGTCTCAGACCTGTATC
FMO09067.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:53:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5484-RB | 1495 | CG5484-RB | 108..1202 | 9..1089 | 4915 | 97.4 | Plus |
CG5484-RC | 1522 | CG5484-RC | 157..1229 | 31..1089 | 4805 | 97.3 | Plus |
CG5484-RA | 1507 | CG5484-RA | 142..1214 | 31..1089 | 4805 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:53:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26718327..26718867 | 30..570 | 2705 | 100 | Plus |
3R | 32079331 | 3R | 26718920..26719308 | 568..955 | 1865 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:53:20 has no hits.
FMO09067.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-17 15:36:02 Download gff for
FMO09067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5484-RB | 124..1108 | 1..984 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:38 Download gff for
FMO09067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5484-RB | 101..1085 | 1..984 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:52 Download gff for
FMO09067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5484-RB | 101..1085 | 1..984 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:52 Download gff for
FMO09067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26718328..26718866 | 31..569 | 100 | -> | Plus |
3R | 26718922..26719308 | 570..955 | 99 | -> | Plus |
3R | 26719367..26719396 | 956..984 | 93 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:38 Download gff for
FMO09067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22544050..22544588 | 31..569 | 100 | -> | Plus |
arm_3R | 22544644..22545030 | 570..955 | 99 | -> | Plus |
arm_3R | 22545089..22545118 | 956..984 | 93 | == | Plus |