FMO09075.5prime Sequence
1120 bp (1008 high quality bases) assembled on 2010-08-09
> FMO09075.5prime
CAGTCGACATGAGCGCGCCGAGCAACAAAATGTCGGCCACCGATCAGATG
CGAGCAATGCTGGACCAGCTTATGGGTACCACACGGAATGGCGACGAGCG
CCAACTGAAATTCTCGGACCCCAGGGTCTGCAAGTCCTTTCTGCTCGACT
GCTGTCCGCACGACATCCTGGCGTCCACGCGCATGGATCTCGGTGAGTGT
CCCAAAGTGCATGACCTGGCTTTCCGCGCAGATTACGAAAGTGCCGCCAA
GACGCGCGACTACTACTACGACATTGAGGCCATGGAACACCTGCAGGCCT
TTATTGCCGACTGCGATCGACGCACCGACTCCGCCAAGCAAAGGTTGAAA
GAGACCCAGGAAGAGCTGACCGCCGAGGTGGCTGAGAAGGCCAATGCTGT
CCATGGCCTCGCCGAGGAGATTGGCAAGAAGTTGGCCAAGGCCGAGGCCC
TGGGCGAGGCCGGCGAAGTGGAGGACAGCATGGAGCTGATGAAGGAGATC
GAGGAGCTGCGTGCTAAGAAGATCAAGGCCGAGCACGAGTACCGCACATC
TATGCCCGCATCCACCTACCAGCAGCAAAAGTTGCGCGTCTGCGAGGTAT
GCTCCGCCTACCTCGGGATTCACGACAATGACATACGTCTGGCGGACCAC
TTTGGTGGTAAGTTACATCTCGGATTCCTCACTATCAGAGAAAAGCTGAT
CGAACTGGAGAAGACGGCGGCGCCGCGGAAGGCGGAGCTCAAGCGGACGG
GTAAGATGACGGACCGCGAGGACGATGGGACGCGGACGCAATCGCTACTT
TGTAGGTGGTCGTGAACTGGACCGCCGCTCTCGCGTACATCGTTCCCGCT
CCAGAGAACGACAGCGCAACCGGGATGGGGACCGCGAACGCCCCAACAAC
GGACGCGGTCTTGATGAGAAGGGTAGTGAGCGACCCAAGGAGCGGCAGAT
GGTCCCGAGCGAGCCGAAAGGGCACCAGATCGTGAGGACGGCGAGATGAC
AGTACAACCACGGCAGGGATCATCGCGACCGGAACCCGATGGCAGCGGGA
TTCGGGACCGACATGACGCCACTAACGAAGACGCTTTGTGACAAGCTGCC
GTTGAGAGGCGTGTCCATCA
FMO09075.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7564-RD | 10443 | CG7564-RD | 171..1260 | 9..1093 | 5055 | 98.1 | Plus |
| CG7564-RB | 2639 | CG7564-RB | 171..1260 | 9..1093 | 5055 | 98.1 | Plus |
| CG7564-RC | 1672 | CG7564-RC | 171..1260 | 9..1093 | 5055 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17514468..17515527 | 9..1065 | 4890 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:39:08 has no hits.
FMO09075.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-17 15:35:58 Download gff for
FMO09075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7564-RA | 161..1237 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:14 Download gff for
FMO09075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7564-RA | 162..1238 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:09 Download gff for
FMO09075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7564-RC | 162..1238 | 1..1072 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:09 Download gff for
FMO09075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17514459..17515535 | 1..1072 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:14 Download gff for
FMO09075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17507559..17508635 | 1..1072 | 98 | | Plus |
