FMO09089.5prime Sequence
1157 bp (1052 high quality bases) assembled on 2010-08-09
> FMO09089.5prime
CAGTCGACATGCAGCAGAAAGTCGAAGAGAAAATCGATCCCCTGACACGC
ATTCAGGAGGAGATCAAGGAGGTAGTGCGGCGCGAGGAGGAGTACCGCCA
GCTGGCCACACTGTCGTCCAGCGCCTCGATCACTTCCGCTTCGCCGGATT
TCGAGACATACACGGTTAATAGTAACTTTGAGCCGAAACTGCAGCAGGAT
GATGAGCACGATCTGGTCGAAAGTCCAGATCAGGACCAGGGCATGCTCGT
TACCGCCCAGCCGGCGGCCGTGCAGACCACCTCGCTCCTGCTGCCCATCG
ACGAGCTGTCCAACACACCATCGCTGGCCTCCAGTGTGAATAGCGCCAAG
GAGGAGAGCCTCGATGGCCAGCACTCGGATGATTCGGGCATTTCGGCCTC
CTCGCAGAGCAACATCCTCATCACTGGGATCACCACGAATGTGGCCAAGC
AGCAGCCACTCAAACTGACCGTGGTGACGCGTCAGGAGCAGCGTTACATT
GGGCCCAACTGCTATAATCTGACACCTGAACCGCCACAGCAGAAGCTGAT
CACCCGCACCATATCCACGCCCCAGCTGAGTGGTCTGCCCCAGAAGCGGC
AGTTTGCCTTCGGTGGCGCCACCAAGGGTGTGATGCAGCGCTTCATTGCC
TCGCATGGCAAGTTGGGCAACACTAGCCCGCTGCCGGCTGCATCTCCAAT
GACGTTGTCCCTGGGCGCCGCCAATGGTAATGGCGGCCTAAATGTCAATG
GCCAGATCAACAATATCAGCAGCAGCAACAATAACAACAACAACAACAAC
AACACCCTCAAGCTGAACACTCGCACAGCCATGGCTTTCCTGGAGTCTGG
AGGTTCCACGGGCGGCATCAACTCGTCATCGGCGGCCCTATCGTCGGCGG
CTATCGAACGCGACTCGGAAGGCAGCCCCTGCGACGAGGATATGTCCCCG
TTGAGCAGAAGATTCAGCGTGAGCTGCAGATCTGAAGTCACGCGAATCGG
AATTGAAGCGTTCTGCGCAAGATCAACAGCAGAACACACTGAAGCCTCCC
TGGACAAGCTGCAACTCAGCCAAATGATGAGGCCGATGCCAAATGATGAA
TGATGAAGACCTCGAGGTGGAACACTGCAAGGGTCGCAAACTGCCCAATG
CCAATTC
FMO09089.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2556-RA | 2304 | CG2556-RA | 386..1534 | 9..1152 | 5345 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12514482..12515518 | 28..1061 | 4940 | 99.5 | Plus |
Blast to na_te.dros performed 2014-11-28 20:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2433..2497 | 747..810 | 187 | 78.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2483..2535 | 751..803 | 157 | 77.4 | Plus |
FMO09089.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-17 15:35:55 Download gff for
FMO09089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2556-RA | 406..1518 | 1..1113 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:24 Download gff for
FMO09089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2556-RA | 379..1491 | 1..1113 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:16 Download gff for
FMO09089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2556-RA | 379..1491 | 1..1113 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:16 Download gff for
FMO09089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12514484..12515517 | 30..1060 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:24 Download gff for
FMO09089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12408517..12409550 | 30..1060 | 99 | -> | Plus |
