FMO09203.5prime Sequence
1073 bp (977 high quality bases) assembled on 2010-09-13
> FMO09203.5prime
CAGTCGACATGTTGACTGGTTCAGGGCATTGCCAAGTGGGATACGTGCGG
CACCTGTCGGAGCTGCGGATAAGGGAACTTGAAAAATTGTCGGTTCGTAT
ACAGGGCTCCATCAACACCGAAAAGTATGCCTGCGAGAGCTATTTCGACT
ACGTCTGTAGCCGCAATCGACCCCTCTTTTCGATCATGGGACACATGCCG
CAAATGGGCGATCTTATGCAGTTGCTGACCGAGCTGCAGAACGATCCAGA
GCCATTCGAGGCTAAGCAGAAGACGCTGGACTTCTTCATCTCCTGCAACG
TGCACCACGCGCTGGAAGACTGCTATCGTGAGACCTATGAGTATTTCAAG
CCACTTTTCGGGTATATAGTTACAAAAAACATGCTCAATGGAGAATCCCA
CGAGCTGGATGACTTTCTGGGCATTTTGGACCGCTTCGTCGTCAGGTTTT
TTTAGGACAGAGAGTCGAATCCCATTCTCAGCAAGCTGGCCACGTATAAG
CAGAAATTTAAAACGCCGCGAGTCTACTTCCATGCTAGAGACCTGAGCCG
GGAGTACAAGGACCTGCGGATCTACCGGGAGAGCTACGAACACAACGTTC
GCAATCTGGAGCAGCACAGAAAACTGAATTCAACATACGAATTGGGGGTT
CAGCGCACCATGCTGGATTGGAGCATGTACCTCTTTCAGAGCCGCAACAA
GCCCATGTCCTACTTCTACTCCACGTTTACGGTCCATTTGTACATGATGC
TTTTTAATAGTCTGGAGCGTCAGCGTGATTTCACGCGGTTTCGCGAAGAT
GTGGAGTGTTTAAAGCTGCCGCAGTTCGTTAATGTTCTGGATGAGCCAGA
ATGCTGGCTGTGATCTACTTAAGAGCTTCCGAGCGGCCTGATAGACTACA
GCGCCTGGATCAACTCGCCTCCACAGAACAGTGGGATATACGATCAGGAA
TGGCGTCCTTCAAAGTACCATCTTGACACAGCGTATATTTTTACTCTTTA
CGCTAGACTTCTGTGAATTTGGGAGGATCTGGCCGAGCATTCCTTCATCT
GGCTAACGACAGAACTTACGACA
FMO09203.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:31:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1092-RD | 1310 | CG1092-RD | 74..1130 | 9..1052 | 4850 | 98 | Plus |
CG1092-RC | 1492 | CG1092-RC | 256..1312 | 9..1052 | 4850 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:31:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4267260..4268123 | 189..1040 | 3690 | 97.6 | Plus |
3R | 32079331 | 3R | 4267025..4267206 | 9..190 | 910 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:31:01 has no hits.
FMO09203.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:18 Download gff for
FMO09203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1092-RA | 66..1128 | 1..1052 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:07 Download gff for
FMO09203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1092-RC | 250..1312 | 1..1052 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:55 Download gff for
FMO09203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1092-RC | 250..1312 | 1..1052 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:55 Download gff for
FMO09203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4267019..4267205 | 1..189 | 97 | -> | Plus |
3R | 4267261..4268136 | 190..1052 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:07 Download gff for
FMO09203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 92741..92927 | 1..189 | 97 | -> | Plus |
arm_3R | 92983..93858 | 190..1052 | 97 | | Plus |