FMO09204.5prime Sequence
358 bp (289 high quality bases) assembled on 2010-09-13
> FMO09204.5prime
CAGTCGACATGCGACTGGCACAACGTTACGGAATTGCACTGGTTGCGCTG
CTTATGGTTGGGGCGACCGTATTGTTCTTCTGGTCGGAAAATATCATTAA
CTACGAAAACATCAAGTTCAACAGTCCTGTGGAGCTGGTCTGGTGGTCCA
GGGATATGTCCTGGAATTACGACGTGCAGCGCCAGTGCGGAATTCATACT
TGCCGCATCACCAACAAGCGGAGCCGCCGTCCGTGGGCCCGGGGCGTCCT
GTTTTACGGCTCAAACATAAAGACGGGAGACTTTCCCCTGCCTCGGAACG
AGCACCAAATCTGGCCCTACTGCATAAGAATCACCAGGAACACCCTTTGT
GCCATAAG
FMO09204.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:30:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| FucTB-RD | 1618 | CG4435-RD | 122..462 | 8..345 | 1630 | 99.1 | Plus |
| FucTB-RA | 1516 | CG4435-RA | 122..462 | 8..345 | 1630 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:30:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9430696..9430931 | 243..8 | 1180 | 100 | Minus |
| 2L | 23513712 | 2L | 9430334..9430430 | 336..242 | 385 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:30:58 has no hits.
FMO09204.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:17 Download gff for
FMO09204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FucTB-RA | 99..455 | 8..358 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:04 Download gff for
FMO09204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FucTB-RA | 122..478 | 8..358 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:54 Download gff for
FMO09204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FucTB-RA | 122..478 | 8..358 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:54 Download gff for
FMO09204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9430306..9430429 | 243..358 | 93 | <- | Minus |
| 2L | 9430697..9430931 | 8..242 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:04 Download gff for
FMO09204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9430306..9430429 | 243..358 | 93 | <- | Minus |
| arm_2L | 9430697..9430931 | 8..242 | 100 | | Minus |
