FMO09207.5prime Sequence
843 bp (843 high quality bases) assembled on 2010-09-13
> FMO09207.5prime
CAGTCGACATGGCGCGCAATGCAGAGAAGGCAATGACAACTTTGGCACGT
TGGCGGGCCGCAAAAGAAGTGGAATCTGGTGAAAAGGAACGCCGGCCCTA
TTTGGCCTCCGAGTGCCACGATTTGCCCAGATGTGAGAAGTTCCGCCTGG
AGATAATACGCGACATATCGAAGAAGGTGGCCCAGATACAGAATGCTGGC
TTGGGAGAATTCCGGATTCGCGATCTGAACGATGAAATCAACAAGTTATT
GCGTGAGAAACGGCATTGGGAAAATCAGATATCCTCATTGGGTGGCCCCC
ACTATAGACGCTATGGTCCCAAGATGTTCGATGCGGAGGGCCGTGAAGTT
CCCGGCAATCGAGGCTACAAATACTTTGTTTTTCGCCAAGGATCTGCCGG
GTGTTCGCGAGCTCTTTGAACAGGATCCTCCGCCGCCACCCAGGATATCT
CGCGCTGAACTAATGAAGGACATAGATGCCGAATACTACGGCTATCGAGA
TGACGAAGATGGTGTTCTGATCCCTCTGGAGGAACGCATCGAACGAGCGG
CCATTCAGAAGGCCGTGCAGGAATGGCGGGAGAAAATGGCCAGAGATGGT
CGCATAATCGATGACGAAGAGGAGGATGAAATATATCCCCTTTCGGGACC
AGCACGCGAAGCCATCGAGGATGCCAAGGCTCGAGCCGCCGTGGAGGATC
CTCATGGCCTATTGGCATCCAAGTTCACCGCTCACGTTCCCGTGCCGACG
CAACAAGATGTACAGGAAGCACTGCTGCGCCAGCGGAAACGGGAACTGCT
GGAGAAATACGCCGGTGGCACTAACGCAAGCTTTCTAGACCAT
FMO09207.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:30:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9667-RA | 883 | CG9667-RA | 43..858 | 9..825 | 3970 | 99.1 | Plus |
| CG9667-RB | 838 | CG9667-RB | 1..813 | 12..825 | 3955 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:30:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8125315..8125944 | 825..195 | 3015 | 98.9 | Minus |
| 3R | 32079331 | 3R | 8126005..8126165 | 195..35 | 805 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:30:51 has no hits.
FMO09207.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:14 Download gff for
FMO09207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9667-RA | 19..840 | 9..832 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:00 Download gff for
FMO09207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9667-RA | 43..864 | 9..832 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:51 Download gff for
FMO09207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9667-RA | 43..864 | 9..832 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:51 Download gff for
FMO09207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8125309..8125943 | 196..832 | 98 | <- | Minus |
| 3R | 8126005..8126165 | 35..195 | 100 | <- | Minus |
| 3R | 8126229..8126254 | 8..34 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:00 Download gff for
FMO09207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3951031..3951665 | 196..832 | 98 | <- | Minus |
| arm_3R | 3951727..3951887 | 35..195 | 100 | <- | Minus |
| arm_3R | 3951951..3951976 | 8..34 | 96 | | Minus |
