FMO09210.5prime Sequence
861 bp (861 high quality bases) assembled on 2010-09-13
> FMO09210.5prime
CAGTCGACATGAGCGCAGAGAAGTCCGATAAGGCCAAGATCAGTGCCCAA
ATCAAGCACGTGCCGAAGGACGCGCAGGTGATCATGTCCATCCTGAAGGA
GCTGAATGTCCAGGAGTACGAGCCGCGCGTGGTCAACCAACTGCTGGAGT
TCACCTTCCGCTATGTAACCTGCATTCTGGACGACGCCAAGGTGTACGCC
AACCATGCGCGCAAGAAGACCATCGACTTGGACGACGTGCGTCTGGCCAC
CGAGGTTACGCTGGACAAGAGCTTCACCGGGCCGTTGGAGCGCCACGTTC
TAGCCAAGGTGGCCGACGTGCGCAACAGCATGCCCCTGCCACCCATTAAG
CCGCACTGCGGTCTCCGACTGCCGCCCGATCGCTACTGTCTCACCGGCGT
CAACTACAAACTGCGGGCCACTAATCAGCCCAAGAAAATGACCTAGTTTT
TTGGTGGAGGGCCGTCCACTGAAGACCGTCGTTAAGCCCGTCTCCAGCGC
CAATGGTCCGAAGAGGCCACACTCCGTGGTGGCCAAGCAGCAGGTGGTGA
CCATTCCCAAGCCCGTCATCAAGTTTACCACCACTACGACAACGAAAACG
GTGGGCAGCTCCGGCGGATCTGGGGGCGGCGGTGGTCAGGAGGTTAAGAG
CGAGAGCACCGGCGCCGGCGGAGATCTCAAGATGGAGGTGGACAGCGATG
CGGCGGCCGTGGGCAGCATCGCTGGCGCATCCGGTTCGGGAGCAGGAAGT
GCCAGCGGAGGAGGAGGAGGAGGAGGATCATCTGGCGTTGGAGTGGCCGT
CAAGCGGGAACGTGAGGAGGAGGAGTTTGAGTTTGTGACCAACGCAAGCT
TTCTAGACCAT
FMO09210.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:34:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| e(y)1-RA | 1124 | CG6474-RA | 99..932 | 9..843 | 4060 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:34:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17842474..17843156 | 160..843 | 3280 | 99 | Plus |
| X | 23542271 | X | 17842259..17842410 | 9..160 | 760 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 14:34:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Doc4-element | 2791 | Doc4-element DOC4 2791bp | 1457..1487 | 793..763 | 110 | 83.9 | Minus |
FMO09210.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:01:14 Download gff for
FMO09210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 79..922 | 2..849 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:37:02 Download gff for
FMO09210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 93..936 | 2..849 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:42 Download gff for
FMO09210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 93..936 | 2..849 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:42 Download gff for
FMO09210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17842253..17842409 | 2..159 | 97 | -> | Plus |
| X | 17842474..17843160 | 160..849 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:37:02 Download gff for
FMO09210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17736286..17736442 | 2..159 | 97 | -> | Plus |
| arm_X | 17736507..17737193 | 160..849 | 98 | | Plus |
