FMO09214.5prime Sequence
451 bp (451 high quality bases) assembled on 2010-09-13
> FMO09214.5prime
CAGTCGACATGGCGGATCGGCTTACACAATTGCAAGACACCGTTAATCAG
CAAGCGGAGCACTTCTGCAATGCTATTGGTGTAATTCAACAAACGTCCCT
TCCAAGTAAATTTGTTAATTTTGAACGCATTGGACCCCAAACGCCAATCC
CATGTCCGCCGCAAGAAGACTATGCCCAATTATTTGCACAGTTAATTGCA
CGATGTGCTAAAGACATCGACACCTTAATCGAGTCTCTTCCAAATGAAGA
CAGCTCCATTGAACTCCAAAATTCTAGCCTTAAGAGGCTCGAGATCGAAA
ACCAGGGAACTGCAAGAGACCTAGAGGAAGTAGTGCAAAAAGGCGAACTT
TTGCTAGAAAAAATGCAGTATTCTTTGGTATGCATTGCTCAGGCTCAATT
AGATATGCAAATAACACTCAAACATGATTTACAAGCAAGCTTTCTTTTTT
T
FMO09214.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:30:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED21-RA | 859 | CG17397-RA | 136..561 | 9..434 | 2115 | 99.8 | Plus |
| MED21-RB | 863 | CG17397-RB | 140..565 | 9..434 | 2115 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:30:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 25115222..25115608 | 434..48 | 1920 | 99.7 | Minus |
| 3L | 28110227 | 3L | 25115662..25115703 | 50..9 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:30:35 has no hits.
FMO09214.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:09 Download gff for
FMO09214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED21-RB | 153..594 | 1..446 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:34:48 Download gff for
FMO09214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED21-RB | 133..574 | 1..446 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:44 Download gff for
FMO09214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED21-RB | 133..574 | 1..446 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:44 Download gff for
FMO09214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 25115216..25115605 | 51..440 | 98 | <- | Minus |
| 3L | 25115662..25115709 | 1..50 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:34:48 Download gff for
FMO09214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3LHet | 600672..601061 | 51..440 | 98 | <- | Minus |
| 3LHet | 601118..601165 | 1..50 | 92 | | Minus |
