FMO09224.5prime Sequence
389 bp (389 high quality bases) assembled on 2010-09-13
> FMO09224.5prime
CAGTCGACATGAAACAGTACCTGGTGCTTGCCCTCGTCTTTGCGGCCATT
CTGGCCATGATCAGCGGCCATCCTCTGGAGGAACAAAAGATCACGCTGGA
AGATGCTGAAGCACAGCCGGGAATCGATGATGGCACTGGAGTTAGGGCCG
CTCGTCACTTTGGCGGCGGCTTTGGCCGCGGAGGATATTGCTGTGGAGGA
GGCGGTGGCTTCCGGCGCGGTGGTTTCGGTGGCGGTGGTTACGGTGGCGG
TGGTTACGGTGGCGGTGGCTATCCAGGTGGCGGCTTTGGCGGATATCCCA
GAGGTGGATTTGGCGGCGGCAGTGCATCAGCATCGGCGTCAGCTTCAGCC
AGTTCCAGTTGGGGACGTAAAGCAAGCTTTCTAGACCAT
FMO09224.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:30:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Listericin-RA | 450 | CG9080-RA | 29..391 | 9..371 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:30:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11241804..11242166 | 371..9 | 1815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:30:38 has no hits.
FMO09224.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:10 Download gff for
FMO09224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9080-RA | 22..395 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:34:50 Download gff for
FMO09224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Listericin-RA | 21..394 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:46 Download gff for
FMO09224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Listericin-RA | 21..394 | 1..375 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:46 Download gff for
FMO09224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11241800..11242174 | 1..375 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:34:50 Download gff for
FMO09224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7129305..7129679 | 1..375 | 98 | | Minus |
