FMO09236.5prime Sequence
413 bp (413 high quality bases) assembled on 2010-09-13
> FMO09236.5prime
CAGTCGACATGCTTCTGCGGATGACCCAGTTTCTCTGCCTTGCGGCACTC
GTTTTGCTAAGTCTTATGCAACTTACGCAGGCAGTAGCCACTCCCAATAA
TAATAATAATAATAATAACAATATTAAACCGAAGGCTGTGGTTCAGGTGC
AACCTGGAAATCCATCGGGAAACAAGCCTGCAGTTGCCACAACTACAATC
AAACCACAGAGACTGGTACCAGATCCCAAATGCCTGCAGCCCTTGGACGT
TGGTCCATGCCGCATGAGCCTAGAAAGGTTCTACTACAACAAGGATTCAA
AAGCTTGCGAGACCTTCAAGTACGGAGGATGTCGAGGCAATGACAATCGT
TGGGGATTCCGACAAACTTGTGAGGAGGCTTGTATTCCCAAAAAGGCAAG
CTTTCTAGACCAT
FMO09236.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:34:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10031-RA | 577 | CG10031-RA | 53..439 | 9..395 | 1935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:34:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3698827..3699040 | 222..9 | 1070 | 100 | Minus |
2L | 23513712 | 2L | 3698589..3698763 | 395..221 | 875 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:34:23 has no hits.
FMO09236.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:01:10 Download gff for
FMO09236.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10031-RA | 46..438 | 1..395 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:36:53 Download gff for
FMO09236.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10031-RA | 47..439 | 1..395 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:33 Download gff for
FMO09236.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10031-RA | 47..439 | 1..395 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:33 Download gff for
FMO09236.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3698590..3698761 | 223..394 | 100 | <- | Minus |
2L | 3698827..3699046 | 1..222 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:36:53 Download gff for
FMO09236.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3698590..3698761 | 223..394 | 100 | <- | Minus |
arm_2L | 3698827..3699046 | 1..222 | 98 | | Minus |