FMO09245.5prime Sequence
548 bp (548 high quality bases) assembled on 2010-09-13
> FMO09245.5prime
CAGTCGACATGGCTCCCCAGCAAAAGGGTAAACAAGGCACGAAGGGCGCC
AAGCAAATCGTGGAGGAAAACAAGACTACACTGACTTTCTACCGGAACAT
GGCCATTGGATGTGCTGCACCCGCTCTGCTCCTCAGTTTCCTGGTCTTCG
AAGTCACCAAAACCTCAGTGTTTATGCACATTCTTTCGTTGCTGATCCTG
GGGAGCTCCTACCAGTTTATGGCGTTCATGTCGCAGGCCAAATACTCTGA
GAGCGGTGCTCTTTTGGACTCCGGCAACGACTTAAATATGGAAGGCGGCA
TCGCGGAAAACGTTAAGGATTTGATCATCCTTACTTCCGGCACCCTGCTG
CTGGCCCTCATCTCAAACTACTTCTGGTTGGTGCTGCTTTTGGCGCCCAT
ACGAGCTGGATGGATGCTCTGGGGCTCCGTCATCCAGCCGTGGCTGTCGC
AACGCAACGCCCAGGACGATAATCCCCAGGTGGACGAGAAAAAGCAAAAA
AAGATGGATCGCAGAATGCGTCGCATGAGAGCAAGCTTTCTAGACCAT
FMO09245.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:33:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8320-RA | 981 | CG8320-RA | 161..683 | 8..530 | 2615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:33:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15993187..15993409 | 308..530 | 1115 | 100 | Plus |
| 2R | 25286936 | 2R | 15992778..15992933 | 15..170 | 780 | 100 | Plus |
| 2R | 25286936 | 2R | 15992992..15993129 | 170..307 | 690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:33:27 has no hits.
FMO09245.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:55 Download gff for
FMO09245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8320-RA | 150..688 | 1..536 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:36:24 Download gff for
FMO09245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8320-RA | 152..690 | 1..536 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:06 Download gff for
FMO09245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8320-RA | 152..690 | 1..536 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:06 Download gff for
FMO09245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15992775..15992933 | 8..170 | 97 | -> | Plus |
| 2R | 15992993..15993129 | 171..307 | 100 | -> | Plus |
| 2R | 15993187..15993416 | 308..536 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:36:24 Download gff for
FMO09245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11880280..11880438 | 8..170 | 97 | -> | Plus |
| arm_2R | 11880498..11880634 | 171..307 | 100 | -> | Plus |
| arm_2R | 11880692..11880921 | 308..536 | 98 | | Plus |
