FMO09246.5prime Sequence
906 bp (906 high quality bases) assembled on 2010-09-13
> FMO09246.5prime
CAGTCGACATGCAAAGTGTAACACGTTTGCTGAGCACAACGCTGACTATA
CAAACGCCGTTTCGCACGGCGCCGGCGTTTCTGCAGCAATTGCGCGGCAA
AACCAAAGTGGTGGAGAAACCAAAACCTGGTGCCGGACAGCAATTCCGAC
GAACCGTGCACTTTCCGGAGAAGTACACCGTTGAGCCGCTGAAGATCACC
CATTTGGCTGGTCGGGATCCCGTCTCCGGTCGCTTGGTGGCCAAGGGCAT
TGGCGGAGGCATCAAACAGCAGTATCGCTGGGTTAAATGGGGGCGGGATG
GTCCCACGGAGGGCGCCCAGGAGGAACTGGTACTCGAGGTGCTACGCGAT
GGCTGTCGCACCGCCAAAGTGGCCCTGGTTGTCGTCGGCGATGAGCTGAA
GTACATCCTGGCCACCGAGAACATGAAGGCTGGCGATATCCTCATTATCT
CGCGCTTTATTCCTAGGATTCCGGTGCGTCCCAACGAAGGCGATGCCTAT
CCATTGGGCGCCTTGCCCGTGGGCACACGCATTCACTGTCTGGAGAAGAA
CCCCGGCCAGATGTGCCACCTGATCCATGCCGCCGGCACCTTCGGCACCA
TTCTGCGCAAGTTCGACGAAAAGGTGGTGGTGCAGCTGCCCTCGAAGCGG
GAGTTCGCCTTCCAGCGCACCTGCATGGCGACGGTTGGTCGCCTGTCCAA
CCCGGAACACAACAAGGAGCATGTGGGCAGTGCCCAGCGGATGCGGGAGA
TGGGCAATCGACCACGTTCCGGTCTGTGGAAGCGCAAGGAAAGCAAACAC
GGACGCAAGATACGCCGATTGCCGCCCATGACCACCATATCGCCACCGGC
TCCGCCAAGGAGGAGGCCATCAGTTGACGCTGCCCCTGGCAAGCTTTCTA
GACCAT
FMO09246.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:33:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL2-RA | 1039 | CG7636-RA | 95..976 | 9..888 | 4270 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:33:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11120941..11121406 | 9..474 | 2255 | 98.9 | Plus |
| 3L | 28110227 | 3L | 11121562..11121978 | 474..888 | 1970 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:33:54 has no hits.
FMO09246.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:01:02 Download gff for
FMO09246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL2-RA | 74..972 | 1..897 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:36:39 Download gff for
FMO09246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL2-RA | 86..984 | 1..897 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:19 Download gff for
FMO09246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL2-RA | 86..984 | 1..897 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:19 Download gff for
FMO09246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11120932..11121406 | 1..474 | 98 | -> | Plus |
| 3L | 11121563..11121986 | 475..897 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:36:39 Download gff for
FMO09246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11114032..11114506 | 1..474 | 98 | -> | Plus |
| arm_3L | 11114663..11115086 | 475..897 | 98 | | Plus |
