FMO09251.5prime Sequence
440 bp (440 high quality bases) assembled on 2010-09-13
> FMO09251.5prime
CAGTCGACATGGTAGCTGGTGGTGCCTCGGAAACGGGCGGCGTGAAGCCG
ATGGTAATTGCGGGCCGCATGGTGCGGGAGCGTGAGCGCCTGATCGGCAT
GTCGCCGGAGGAGCGCGCCTGGCGCAAACAGTGGCTGAAGGACCAGGAGC
TGCACCATGGACCCCGCAAGGTGCCCGCCCTGGAGCTGGAGCTGAACAAC
CCCATCAAGCGCTTCTACCGCGCTCCCCTCGACAAGGTCTGCAATGTTTT
GGAACCCGTCCTGGGCTTTCAGCGCGCGTACACCGTGCGCTTCTGGACCG
GAAAGGCTCTGCTCGCCCTAACCGGAATCTACGCCGGCGCCTACTACTTC
AAGTACAACCAGAATGTAAGTAATTGGTCGAGGATTCAAGTTGGCTATTA
CTATAAGTCATTCCAAATGTACGCAAGCTTTCTAGACCAT
FMO09251.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:33:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)35Di-RC | 992 | CG13240-RC | 103..460 | 9..366 | 1790 | 100 | Plus |
l(2)35Di-RA | 710 | CG13240-RA | 103..460 | 9..366 | 1790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:33:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15750721..15750976 | 264..9 | 1280 | 100 | Minus |
2L | 23513712 | 2L | 15750493..15750652 | 422..263 | 800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:33:09 has no hits.
FMO09251.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:50 Download gff for
FMO09251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)35Di-RB | 70..495 | 1..426 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:36:15 Download gff for
FMO09251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)35Di-RA | 94..460 | 1..366 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:56 Download gff for
FMO09251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)35Di-RA | 94..460 | 1..366 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:56 Download gff for
FMO09251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15750497..15750651 | 264..418 | 100 | <- | Minus |
2L | 15750722..15750985 | 1..263 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:36:15 Download gff for
FMO09251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15750497..15750651 | 264..418 | 100 | <- | Minus |
arm_2L | 15750722..15750985 | 1..263 | 98 | | Minus |