FMO09253.5prime Sequence
248 bp (248 high quality bases) assembled on 2010-09-13
> FMO09253.5prime
CAGTCGACATGCGACGTTGGCCCAAGTCAACACTTAACATTAACAAATGC
CTTACTACAATACTGGTCGGCCAATTTGTTCTTTGCTTTTTGTCTGGCGC
TTTTCATTATTATTGTTTGTTTGGCGGCGACGGCGGCGCCCGTAAAAAGC
CGTTAGAAAAGCGGGAAGCTGAATTCGTTGGCGTTGGTAAGTCGCGAAGC
AAAAAAACGTACGAAAACGCACTTTTATTTGCAAGCTTTCTAGACCAT
FMO09253.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:33:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7370-RA | 1410 | CG7370-RA | 287..508 | 9..230 | 1110 | 100 | Plus |
| Syn1-RD | 3741 | CG7152-RD | 116..337 | 230..9 | 1110 | 100 | Minus |
| Syn1-RC | 3735 | CG7152-RC | 116..337 | 230..9 | 1110 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:33:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21770198..21770419 | 9..230 | 1110 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:33:02 has no hits.
FMO09253.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:48 Download gff for
FMO09253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7370-RA | 283..511 | 1..234 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:36:11 Download gff for
FMO09253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7370-RA | 283..511 | 1..234 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:52 Download gff for
FMO09253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syn1-RC | 112..341 | 1..234 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:52 Download gff for
FMO09253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21770194..21770417 | 1..228 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:36:11 Download gff for
FMO09253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21763294..21763517 | 1..228 | 98 | <- | Plus |
