Clone FMO09267 Report

Search the DGRC for FMO09267

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:92
Well:67
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15210-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09267.5prime Sequence

233 bp (233 high quality bases) assembled on 2010-09-13

> FMO09267.5prime
CAGTCGACATGGGAGGCTGTTGCTCAAAGGATTTGGATGACAAACGCTCG
TGGAGTCCCGAGGAGACCAAGAATGGCAGCACCACATCAACAATCATTGC
CCAGCCGCTGGATGAGGTGGGCACCACCGGTGTCTTCACATTGACACGCA
CCACCACTAGCACCACGCGGCAGGAGAAGACGGTGACCACCACCAGCGAG
GAGCAGGAGCAGGATGCAAGCTTTCTAGACCAT

FMO09267.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:32:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15210-RA 609 CG15210-RA 158..364 9..215 1035 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:32:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10839513..10839650 78..215 690 100 Plus
X 23542271 X 10839387..10839455 9..77 345 100 Plus
Blast to na_te.dros performed 2014-11-26 14:32:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmir\TRIM 3111 Dmir\TRIM DMTRIM 3126bp Derived from X59239 (Rel. 35, Last updated, Version 3). 2784..2838 59..112 110 69.1 Plus

FMO09267.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:37 Download gff for FMO09267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15210-RA 1..210 9..216 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:48 Download gff for FMO09267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15210-RA 152..369 1..222 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:33 Download gff for FMO09267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15210-RA 152..369 1..222 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:33 Download gff for FMO09267.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10839381..10839455 1..77 94 -> Plus
X 10839513..10839655 78..222 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:48 Download gff for FMO09267.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10733414..10733488 1..77 94 -> Plus
arm_X 10733546..10733688 78..222 97   Plus