FMO09269.5prime Sequence
428 bp (428 high quality bases) assembled on 2010-09-13
> FMO09269.5prime
CAGTCGACATGGAGGCCAAGACCGACGCACCCATCTCACCAGCGCCCACA
ACAAATCCGCCGGCAGAAGCTGGCAAGGAGCCAAATGCAAGCAGCAATGC
GCAAGCAAACCCGACCGCTGCGCCGGGAGCTCCTCCATCCGGAGCCATTG
CCGTTGGCCAGTCCACAAATCCAGTGGCGCAGCAGCAACAGCAGCCGGCG
GTGGCCAAGAAGCCCAGTAGCGAGACAAACAACATGCCCACGCGACAGTA
CCTCGACCAGACGGTGGCGCCGGTTCTGCTCCACGGAATGCAGGCCCTGG
CTCGCGAACGGCCCACGGATCCCATACAGTTCCTGGCCTCCTACCTACTA
AAGCATAGCAACGGGTGCGACGAGAACAACGCCTCCGCCGCCGCCGTGGA
CAACAACTCCGCAAGCTTTCTAGACCAT
FMO09269.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:32:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpy-30L1-RA | 655 | CG6444-RA | 165..567 | 8..410 | 2015 | 100 | Plus |
| Dpy-30L2-RB | 506 | CG11591-RB | 192..299 | 246..353 | 195 | 79.8 | Plus |
| Dpy-30L2-RA | 550 | CG11591-RA | 236..343 | 246..353 | 195 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:32:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10732817..10733219 | 8..410 | 2015 | 100 | Plus |
| 3L | 28110227 | 3L | 4047195..4047302 | 353..246 | 180 | 77.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:32:15 has no hits.
FMO09269.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:37 Download gff for
FMO09269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6444-RA | 64..481 | 1..420 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:46 Download gff for
FMO09269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dpy-30L1-RA | 159..576 | 1..420 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:33 Download gff for
FMO09269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dpy-30L1-RA | 159..576 | 1..420 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:33 Download gff for
FMO09269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10732811..10733228 | 1..420 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:46 Download gff for
FMO09269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10732811..10733228 | 1..420 | 98 | | Plus |
