Clone FMO09273 Report

Search the DGRC for FMO09273

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:92
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13332-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09273.5prime Sequence

451 bp (451 high quality bases) assembled on 2010-09-13

> FMO09273.5prime
CAGTCGACATGTCCACCGACGAGGATTCCCTGGGCAGTCCCCTCAAGCCG
GCCACGCCCACACCCGGCGAGCGCGAACCGACGCGAGAACGCCATCGAGG
CGGTCGATCTGGAGCCTCGGATCTGCTGCGCCATCAGCAGAGCTTTGAGG
CTCGCTACAGCGGGATCATCCAGAAGCAAATCTGGGAGACGAGCATCAAC
AAGGATGTGCTGGAACGTCAGCTAAATGCGTACTTCCCTTTCTCCAGGAG
CGCCTCGCTGACCAAGGACGCATCCGGCGGATTCGATCAGCTCCTGGCGC
CGGCGACAAGTGGAACTGGTCCGAAGTCTCGATCCCTGGCCACCACGCCC
ACCAGGCGACCGGCGGGCGTCTGTCTGGAGATGCTGGAGACGGTGGATGT
GGCCTCCCTCGATCAACAGAAGCAAGCGAAGGCAAGCTTTCTAGATCTTT
T

FMO09273.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG13332-RA 1072 CG13332-RA 102..525 8..431 2105 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:32:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13525478..13525901 8..431 2105 99.8 Plus
Blast to na_te.dros performed on 2014-11-26 14:32:05 has no hits.

FMO09273.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:34 Download gff for FMO09273.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 1..426 9..435 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:41 Download gff for FMO09273.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 96..529 1..436 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:27 Download gff for FMO09273.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 96..529 1..436 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:27 Download gff for FMO09273.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 13525472..13525905 1..436 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:41 Download gff for FMO09273.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9412977..9413410 1..436 98   Plus