FMO09281.5prime Sequence
353 bp (353 high quality bases) assembled on 2010-09-13
> FMO09281.5prime
CAGTCGACATGTTCAAGCTGTCTGCCCTCGTTGTCCTGTGCGCTCTGGTG
GCCTGCTCCTCGGCTGAGCCCAAGCCCGCTATCCTGGCCGCCGCTCCAGT
GGTTGCAGCTGCTCCTGCCGGCGTGGTCACCGCTACCAGTTCGCAGTACG
TGGCCCGCAACTTCAACGGTGTGGCTGCTGCTCCAGTTGTTGCCGCTGCC
TACACCGCTCCAGTTGCCGCCGCTGCCTATACCGCTCCAGTTGCCGCCGC
TGCTTATACCGCTCCAGTTGCCGCTGCCTACTCTGCTTATCCGTATGCCG
CCTACCCTTACAGCGCTGCATACACCACTGTTTTGGCAAGCTTTCTAGAC
CAT
FMO09281.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:31:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13068-RA | 450 | CG13068-RA | 43..370 | 8..335 | 1640 | 100 | Plus |
| CG13674-RB | 559 | CG13674-RB | 251..333 | 193..281 | 220 | 85.4 | Plus |
| CG13674-RA | 687 | CG13674-RA | 251..333 | 193..281 | 220 | 85.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:31:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16269516..16269831 | 20..335 | 1580 | 100 | Plus |
| 3L | 28110227 | 3L | 16269676..16269743 | 207..274 | 280 | 94.1 | Plus |
| 3L | 28110227 | 3L | 16269703..16269770 | 180..247 | 280 | 94.1 | Plus |
Blast to na_te.dros performed 2014-11-26 14:31:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2434..2539 | 275..170 | 134 | 62.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2799 | 220..168 | 103 | 66 | Minus |
FMO09281.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:29 Download gff for
FMO09281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13068-RA | 41..374 | 1..339 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:33 Download gff for
FMO09281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13068-RA | 40..373 | 1..339 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:17 Download gff for
FMO09281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13068-RA | 40..373 | 1..339 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:17 Download gff for
FMO09281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16269517..16269834 | 21..339 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:33 Download gff for
FMO09281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16262617..16262934 | 21..339 | 99 | | Plus |
