FMO09283.5prime Sequence
506 bp (506 high quality bases) assembled on 2010-09-13
> FMO09283.5prime
CAGTCGACATGGCACCCAATCGCAAGGACGGAAAGAAGAATATTACGGAA
AAGCAGGAAGCGAAAATGTTAGCCGAAGCTGGTGGAAAATCGGCCAGTGA
TAGCGATGCGAGCGATACCGAATGGCAAATGGTTCAATTTGTGGACGATC
CGAATGTCCTGCGAGTTGCGATCATAGCTTGTCCTGAGGTGACCTTGGGC
TTTTTACTGTGTGGCGTTGGCTATCAGAAGGATAGATTTCGCAACTATAT
GATGGTTGAGAGCGAGACGCCACAAGAGGATGTGGAGCAGTTCTTTCTCA
CGGTTTACAGGAGATCCAATATCGGCATTGTCATCATCGACTACGATACG
GTGAAAAGGCTTCGTACCATGATGCAACGATGTTCTCAGCTGCTTCCCGT
CCTGGTCACGGTGCCCAACAAATCCTCACTGATCACGTACTTGGACTAAA
AGGAGCGAAATCGGCGACTTCGCCAGCGTGATGCCTATGCAAGCTTTCTA
GACCAT
FMO09283.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:32:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15719-RD | 747 | CG15719-RD | 70..549 | 9..488 | 2385 | 99.8 | Plus |
| CG15719-RC | 717 | CG15719-RC | 40..519 | 9..488 | 2385 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:32:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13004153..13004377 | 488..264 | 1110 | 99.6 | Minus |
| X | 23542271 | X | 13004567..13004744 | 186..9 | 890 | 100 | Minus |
| X | 23542271 | X | 13004430..13004508 | 264..186 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:32:12 has no hits.
FMO09283.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:36 Download gff for
FMO09283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RB | 1..489 | 9..498 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:44 Download gff for
FMO09283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RC | 33..528 | 1..498 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:30 Download gff for
FMO09283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RC | 33..528 | 1..498 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:30 Download gff for
FMO09283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13004144..13004376 | 265..498 | 97 | <- | Minus |
| X | 13004430..13004508 | 186..264 | 100 | <- | Minus |
| X | 13004568..13004750 | 1..185 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:44 Download gff for
FMO09283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12898177..12898409 | 265..498 | 97 | <- | Minus |
| arm_X | 12898463..12898541 | 186..264 | 100 | <- | Minus |
| arm_X | 12898601..12898783 | 1..185 | 97 | | Minus |
