FMO09284.5prime Sequence
863 bp (863 high quality bases) assembled on 2010-09-13
> FMO09284.5prime
CAGTCGACATGTTTATTTTCACGATTTTCAAGATCATTTTGCTCTGGCCG
GGTGCTATGTCACAGTTCCTTGAACCGAATTGTGGCTACCCTGACATTAG
CCCAAAAATAATGCATGGTCAGAATGCAGAAAATGGAACCAATCCTTGGA
TGGCATATATATTTAAATATAATGATAAGGAAGTAGCTGAGCTCGTATGC
GGCGGAACTCTCATTCACAAACAATTCGTTTTGAGTGCAGCCCATTGCAT
CAAAAGAGATCAAATACTTGCCGTTCGTCTTGGAGAACATAGTTCATCAA
GGTATTTTGCAGTGACCAAGGCCTTTCGGAACAAGTACTTTACAACTGGC
AGTTATAGTAACGATATAGGCATACTTCGTATACAACCAATAGTGAAGTT
TAATGCTGTTATCAGGCCCATTTGCATTATCACGGATCCCACAATATTGC
CAAATGTCAAAACCTTCAAGGCTGCAGGCTGGGGAAAAACAGAAAACGAG
ACATTTTCGAAGGTGCTTAAAACCGTAGAGTTGAACGAACTCAATGCATC
TGAATGTTACAATATGCTTTGGGTGAATGTAACCGAGAGTCAGATCTGCG
CAGGACATCCGGACGGGGATACGTGCGCGGGCGACTCTGGAGGTCCATTG
ATTCATCCGGTATACATGGATGGATCTCTGCGGTACGTGCAACTGGGAAT
CATCAGTTTTGGAAGCTCACTATGCAACAGTCCTGGGGTTTATACACGGC
TATCAAGCTTTATCGACTGGATTCTTATGGTGGTAGATAACTACACGGTA
CGCAGTCCACCGAAGATTCAGTATCGAGTATGGCCTTACGGTAAAGCAAG
CTTTCTAGACCAT
FMO09284.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:32:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30083-RB | 868 | CG30083-RB | 3..839 | 9..845 | 4155 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:32:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15711626..15712070 | 845..401 | 2180 | 99.3 | Minus |
| 2R | 25286936 | 2R | 15712429..15712642 | 222..9 | 1070 | 100 | Minus |
| 2R | 25286936 | 2R | 15712127..15712263 | 405..269 | 685 | 100 | Minus |
| 2R | 25286936 | 2R | 15712324..15712369 | 268..223 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:32:09 has no hits.
FMO09284.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:34 Download gff for
FMO09284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30083-RB | 3..845 | 9..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:43 Download gff for
FMO09284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30083-RB | 3..845 | 9..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:28 Download gff for
FMO09284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30083-RB | 3..845 | 9..851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:28 Download gff for
FMO09284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15711620..15712065 | 406..851 | 99 | <- | Minus |
| 2R | 15712127..15712263 | 269..405 | 100 | <- | Minus |
| 2R | 15712324..15712369 | 223..268 | 100 | <- | Minus |
| 2R | 15712429..15712646 | 1..222 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:43 Download gff for
FMO09284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11599125..11599570 | 406..851 | 99 | <- | Minus |
| arm_2R | 11599632..11599768 | 269..405 | 100 | <- | Minus |
| arm_2R | 11599829..11599874 | 223..268 | 100 | <- | Minus |
| arm_2R | 11599934..11600151 | 1..222 | 98 | | Minus |
