FMO09286.5prime Sequence
887 bp (887 high quality bases) assembled on 2010-09-13
> FMO09286.5prime
CAGTCGACATGATGATTTCAGACAGTCAGAAGAAAGGACTGCGGGAGTTA
CTTCTAAATGACAAGAACTTAACTGTTCTGCTACAGTTGGCCAAAGGGGC
CACCAAAAATATGTGCAAAACCGAAGACCCGGAGGAGGCCCTTCGTCTGA
TCACTACACACATTCCAGACATTTACGTACTGCTTTCCAAGCGCGCTATA
AAAAAGGAACTCCTCTTTACGTATTTGAGCAATCGACGCGCTGACGCAGC
CACAGACTTTAGCAAGGCAGACCTCATAGCCAAGGTTATACAGTATTGGA
AGCAGGAGCATAAATCAAGCATAGAGCTTTCCGGAGACCAGACTTCCAGC
TCACTTCATATTCAGAGCGAAGAGGATTATCCCATTCACACGATTGCCCG
CAAGTTCGGCGAGTGGTTCTTCGAACGCTTCAACGCAGACGCCCTTAGTC
TGGTGGATTTATGGGCAGATGCGGCTCTACATCTCACGATCATAGCCAGT
GATGGAATCAATGAGTGGGAGTGTACGACGGCTGCCGAGGTGTTATCGGC
ACTAACGAGCGCTAAGCAGCAGTTTGACTTTTACTTTAATCCAAACCTGA
CGCACGCCGGAATTCAGGGTCGAATGGACTCGTACGGACATTTCTTAGTG
ATCTGCTGCGGCACTCTGCACTCCCGTGATAGCTGCGTCGGAATCTTTGA
ATGTGCCTTCGGGCTTTTTCGGGACCCCTTGGCTGACAACAACTGGAAAC
CCAAAAAAGTGAAGTGCTTCCTTAAAAGTGAAGCTCAGCCCCCAGAGCTG
CACTATCTGTGCTCGAGCGAAACTCTGCAGACAGCTCTGGAGCTGTCAGT
ACCCTCTGATGACTTGAACGCAAGCTTTCTAGACCAT
FMO09286.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:31:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13876-RA | 1337 | CG13876-RA | 55..919 | 5..869 | 4325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:31:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 206375..207109 | 135..869 | 3675 | 100 | Plus |
| 3L | 28110227 | 3L | 206188..206318 | 5..135 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:31:36 has no hits.
FMO09286.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:26 Download gff for
FMO09286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13876-RA | 1..864 | 9..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:27 Download gff for
FMO09286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13876-RA | 50..923 | 1..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:12 Download gff for
FMO09286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13876-RA | 50..923 | 1..875 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:12 Download gff for
FMO09286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 206183..206318 | 1..135 | 97 | -> | Plus |
| 3L | 206376..207113 | 136..875 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:27 Download gff for
FMO09286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 206183..206318 | 1..135 | 97 | -> | Plus |
| arm_3L | 206376..207113 | 136..875 | 99 | | Plus |
