Clone FMO09290 Report

Search the DGRC for FMO09290

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:92
Well:90
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34242-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09290.5prime Sequence

200 bp (200 high quality bases) assembled on 2010-09-13

> FMO09290.5prime
CAGTCGACATGGCAGTCCTGCGTGGTTGGAGATTCGTTGGATTCGTGTCC
TGCATCGTGGGCGCCGTGGGCCTCACCCTATACCCCGTCATTGTGGACCC
CATGGTTAACACTGAGAAATACAAAACCCTGCAGGAATACAGCAAAATCA
AGAGAGATGAACTGCAGCACATTAAAAGGCAGGCAAGCTTTCTAGACCAT

FMO09290.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG34242-RB 343 CG34242-RB 14..187 9..182 870 100 Plus
CG34242-RA 366 CG34242-RA 30..203 9..182 870 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12534067..12534240 9..182 870 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:31:27 has no hits.

FMO09290.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:24 Download gff for FMO09290.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34242-RA 23..203 1..182 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:21 Download gff for FMO09290.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34242-RA 23..203 1..182 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:06 Download gff for FMO09290.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34242-RA 23..203 1..182 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:06 Download gff for FMO09290.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 12534060..12534240 1..182 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:21 Download gff for FMO09290.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12527160..12527340 1..182 97   Plus