Clone FMO09292 Report

Search the DGRC for FMO09292

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:92
Well:92
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42363-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09292.5prime Sequence

488 bp (488 high quality bases) assembled on 2010-09-13

> FMO09292.5prime
CAGTCGACATGACGTCAACAACAAACGTTTTAAGTATTGGAAATGAAACC
GAGGAACTATATTACAAGGTACAGAAAACAAGCAACCCTAAGGCATATTT
TGAGTTCGAGTTTGAGAACCACATGCGAAAATTACTGCTCAATGGCGAAA
AACCCAAGGATCTGGATGAAAAGTCCATCGGAAGATTTGCAGCCACTGAG
ATAACGAGAAATGGCAAGCAGTACTATGAGTTCGTTCCTGACGGATACAA
AATTGGAGTCATCATCAGTGGATGCTCATTTCTGCCCAAAGACATGGTCT
TCCGCGTGAAAAAGAAGATTGCCAAAGAACACTGGGTTAACGAAAATGTA
ATTCAATATAAAAAGAATTCAATGCGCCACATACTGGGTATCGTATCCGA
ATGCTTGCAGGAAGAGTGCAATGATATCTACCAATATCTATGTTATCTGA
TACAAAATGATCCCAACAAGGCAAGCTTTCTAGACCAT

FMO09292.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:31:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG42363-RB 1930 CG42363-RB 1014..1475 9..470 2280 99.6 Plus
CG42363-RA 1587 CG15675-RA 671..1132 9..470 2280 99.6 Plus
CG42362-RB 1930 CG42362-RB 1014..1475 9..470 2280 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:31:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21665192..21665653 9..470 2280 99.6 Plus
Blast to na_te.dros performed on 2014-11-26 14:31:20 has no hits.

FMO09292.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 10:00:22 Download gff for FMO09292.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42363-RA 707..1171 9..474 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:35:17 Download gff for FMO09292.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42362-RA 707..1171 9..474 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:03 Download gff for FMO09292.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42362-RB 1014..1478 9..474 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:03 Download gff for FMO09292.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21665192..21665656 9..474 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:35:17 Download gff for FMO09292.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17552697..17553161 9..474 99   Plus