FMO09311.5prime Sequence
793 bp (793 high quality bases) assembled on 2010-10-13
> FMO09311.5prime
CAGTCGACATGAGGAAAATGCCTCTTGGACTACCCATTTGGACACCATTG
TTCATCCTTTTCTTGCTTTTCCTGGCCGGCGTTTGGGGTGTGAATCGCAA
TGGTCTGCTGGACTTTTATCATGAACAGGTTCATGGAACTCCTTTAACTA
AGAAGGAAGTCGAGTGTCCAGAGGATGGAATTATGAACATCAAGCAAAGC
CGTTACGATAGATCACTGAATCCTTTCAAGGCATTTCTGAATTGGCCGGA
TAGACACAAAGTACATAAGGATGATAAATATAAGCCACTTGAAGGTGATT
TGTATGGCCACGAAGAGCCTCTATTTGATTTTGAATTGACAAAGTACCAA
GCCGGTGCACCGCTAGTTGATAACAGAGCTGATCACTTTTTAGCCCAAGA
TTATAAATCAGACTTTGATCGCAAGCTGGGTGTAATGGATCATGATTATC
CCGATCATTTTAAGCTTAATGCAGATCACTTTAATCTTGATGCAGATCAG
TTTAATACGGTGTCAGACCGCTTGAATCAGAATGAAAATCATTTCAGTCT
GGATGCAGATCAATTAAATCGTGATGCCAATCAATTCAACGTGAATACAA
ATAACTTTAATCAGCATCGTGACGTGGATGTGCTTGACAACTTTCAAGCT
AACAAGCCCGAATTGGTAAATAGTCCCATGATGGACTATAAACGTGAATT
CGCCAGCGATGAAGCTAATCCTTATGTTGAGAGCCTTCAGCAGCGCTATG
AGCCCTTACCACATGCTTATAAGACGCAAGCTTTCTAGACCAT
FMO09311.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:42:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32718-RB | 962 | CG32718-RB | 70..835 | 8..773 | 3830 | 100 | Plus |
| CG32718-RD | 965 | CG32718-RD | 70..838 | 8..773 | 3790 | 99.6 | Plus |
| CG32718-RC | 977 | CG32718-RC | 70..850 | 8..773 | 3670 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:42:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7778635..7779060 | 223..648 | 2130 | 100 | Plus |
| X | 23542271 | X | 7778436..7778571 | 87..222 | 680 | 100 | Plus |
| X | 23542271 | X | 7779117..7779243 | 647..773 | 635 | 100 | Plus |
| X | 23542271 | X | 7778274..7778355 | 8..89 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:42:19 has no hits.
FMO09311.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:05 Download gff for
FMO09311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32718-RB | 63..835 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:40:57 Download gff for
FMO09311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32718-RB | 63..835 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:21 Download gff for
FMO09311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32718-RB | 63..835 | 1..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:21 Download gff for
FMO09311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7778267..7778353 | 1..87 | 96 | -> | Plus |
| X | 7778437..7778571 | 88..222 | 100 | -> | Plus |
| X | 7778635..7779060 | 223..648 | 100 | -> | Plus |
| X | 7779119..7779243 | 649..773 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:40:57 Download gff for
FMO09311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7672300..7672386 | 1..87 | 96 | -> | Plus |
| arm_X | 7672470..7672604 | 88..222 | 100 | -> | Plus |
| arm_X | 7672668..7673093 | 223..648 | 100 | -> | Plus |
| arm_X | 7673152..7673276 | 649..773 | 100 | | Plus |
