FMO09316.5prime Sequence
470 bp (470 high quality bases) assembled on 2010-10-13
> FMO09316.5prime
CAGTCGACATGGCATCTGGAATTAATTTGAGCCGCGAGTGTCAGCACGTG
TTCGAGCAGATCCGGAAGCTGAAGCAACATCGCTACGCGGTCTTCGTCAT
CCAGGACGAGCGGGAGATTAAGGTGGAGGTGCTTGGAGTAAGGGAGGCGA
ACTACGACGACTTCCTGGCGGATCTGCAACGTGCCGGATCCAATCAGTGC
CGATTCGCTGTCTACGACTATGAGTATCAGCACCAGTGCCAGGGCACCTT
GTCCACCTGCCTGAAGGAGAAGCTAATCCTGATGCTCTGGTGTCCCACTC
TGGCCAGGATCAAGGACAAGATGCTCTACTCCAGCACGTTTGCGGTGCTC
AAGCGAGAGTTTCCCGGCGTCCAGAAGTGCATTCAGGCCACCGAACCGGA
GGAGGCGTGCCGCAATGCTGTCGAGGAGCAGCTGCTCTCTTTTGACAGGG
AGGCAAGCTTTCTAGACCAT
FMO09316.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:42:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6873-RA | 680 | CG6873-RA | 171..615 | 8..452 | 2180 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:42:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18739281..18739725 | 452..8 | 2180 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:42:49 has no hits.
FMO09316.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:10 Download gff for
FMO09316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6873-RA | 1..447 | 9..453 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:41:12 Download gff for
FMO09316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6873-RA | 164..615 | 1..452 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:34 Download gff for
FMO09316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6873-RA | 164..615 | 1..452 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:34 Download gff for
FMO09316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18739281..18739729 | 1..452 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:41:12 Download gff for
FMO09316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18633314..18633762 | 1..452 | 98 | | Minus |
