FMO09327.5prime Sequence
749 bp (749 high quality bases) assembled on 2010-10-13
> FMO09327.5prime
CAGTCGACATGAGTTCTGGTAAACATTTGGCCAAAGGTTCCCCCAAGCCT
GTACTCCCTGACGATGGAGTCCTTCGCCTGTACTCCATGAGGTTCTGTCC
CTACGCTCAGCGGGCTCATCTCGTCCTGAACGCCAAGAATGTGCCCTATC
ACAGTGTCTACATCAATCTCACCGAGAAACCAGAGTGGCTGGTGGAAGTG
AGTCCGTTGCTTAAGGTGCCTGCCCTGCAGCTGGTGGCGGAGAAGGGTGA
GCCCTCGCTCATCGAGTCGCTGATTATTGCCGAGTATCTGGACGATAAGT
ACCCGGAGAATCCGTTGCTGCCCAAGGACCCATTGAAGCGGGCACAGGAC
AAGATTCTGCTGGAACGTTTCAGCAGCATCACCAGTGCCTTCATAAACAT
CCTTGTGCAGGGCACCGGTCTGGAGGATTACTGGTCGTCACTTGATATCT
TTGAGGAGGAGTTGACCAAGCGGGGCACCCCATATTTTGGCGGCAACAAG
CCGGGATTCGTGGACTACATGATCTGGCCCTGGTTCGAACGCCTCTCTGT
AATCGAGTTGAAGTTGCAGAAGGAGTACAACTTCAACGAGAGTCGTTTCC
CGAAGATCACCAAGTGGATTGCCCTCCTGAAGGCGGACTCGGTGGTGCAG
TCCTTCTATGCCACTCCCGAGCAGCACAACGAGTTCTGGCGCACCCGCAA
GGCCGGCAATGCAAACTACGATCTGCTGGCTGCAAGCTTTCTAGACCAT
FMO09327.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:43:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstO3-RA | 881 | CG6776-RA | 70..792 | 9..731 | 3585 | 99.7 | Plus |
| se-RA | 825 | CG6781-RA | 54..226 | 24..196 | 280 | 78.2 | Plus |
| GstO2-RB | 912 | CG6673-RB | 524..618 | 444..538 | 205 | 82.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:43:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8519510..8520206 | 35..731 | 3455 | 99.7 | Plus |
| 3L | 28110227 | 3L | 8520700..8520833 | 63..196 | 250 | 79.1 | Plus |
| 3L | 28110227 | 3L | 8522705..8522799 | 538..444 | 190 | 80 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:43:20 has no hits.
FMO09327.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:14 Download gff for
FMO09327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6776-RA | 67..789 | 9..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:41:28 Download gff for
FMO09327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstO3-RA | 70..792 | 9..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:47 Download gff for
FMO09327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstO3-RA | 70..792 | 9..731 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:47 Download gff for
FMO09327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8518954..8518981 | 9..36 | 100 | -> | Plus |
| 3L | 8519512..8520206 | 37..731 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:41:28 Download gff for
FMO09327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8512054..8512081 | 9..36 | 100 | -> | Plus |
| arm_3L | 8512612..8513306 | 37..731 | 99 | | Plus |
