FMO09332.5prime Sequence
776 bp (776 high quality bases) assembled on 2010-10-13
> FMO09332.5prime
CAGTCGACATGCCCTTAACCACCAATACAGTGGACAAAAAAAATGAACAC
GAAAAACCATTTGGCTTAGAAATACCCAAACCAGAGCTATTTATATATCA
GCACCCCGCAGCCGATGAGTCCTTTCTTAAAGAACAACCTACCAAGGTCG
AAGATGTGATCGAGTACCTGGATGTGCTTGAAAACGCCAACAAGACCGAT
TCGTCAAAAAAAAGACAAAAATCTACGATTACCATGGATGACATAAAATG
TATTGTGACACGGCGAAGTGCTGTAAGCACGACAACATTTCGTCGAGGCA
AAGCAAAAAGAGCCTTAATTAACACGAATCAATTCACGTTTATGCGTCAG
ATTGATTCGGAACCCGATGATCGTGTTTTGGCCAGAGAACAGCGTGAAGA
TGTGGCCGAAACATTTCGTCGGATGGGAAATTATGAGTATCGTAAACTAA
ACTTCAGTTTAGCCAAAGACTACTATTCAAAGGGTATACAATACATAAAA
GACTCGCCTGTCCTATACGTAAATCGAGCCCTTTGCTTTATCAAGTTACG
CGAATTTAAGCTAGGTATCATAGATTGTGATTATGTGTTGGCCAAAATTG
ACGAACATTATCTGCGTGCTTGGCTTTATAGGGCAGCTGCCTATAAGCGT
CTGAATGATGAGCCAAACTTTGAATATAGTGTTGATCGCGCCAGACGATT
TAACAGATCGGATGCTGACTTTATAGATGAATTCCTGGACAAAATGAGAT
CGCTTCTCGCAAGCTTTCTAGACCAT
FMO09332.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:43:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34274-RA | 839 | CG34274-RA | 42..791 | 9..758 | 3735 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:43:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15732036..15732382 | 200..546 | 1720 | 99.7 | Plus |
| 3R | 32079331 | 3R | 15732433..15732646 | 545..758 | 1070 | 100 | Plus |
| 3R | 32079331 | 3R | 15731787..15731977 | 9..199 | 955 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:43:24 has no hits.
FMO09332.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:15 Download gff for
FMO09332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34274-RA | 1..753 | 9..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:41:29 Download gff for
FMO09332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34274-RA | 36..794 | 1..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:48 Download gff for
FMO09332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34274-RA | 36..794 | 1..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:48 Download gff for
FMO09332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15731781..15731977 | 1..199 | 97 | -> | Plus |
| 3R | 15732036..15732380 | 200..544 | 99 | -> | Plus |
| 3R | 15732433..15732649 | 545..762 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:41:29 Download gff for
FMO09332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11557503..11557699 | 1..199 | 97 | -> | Plus |
| arm_3R | 11557758..11558102 | 200..544 | 99 | -> | Plus |
| arm_3R | 11558155..11558371 | 545..762 | 99 | | Plus |
