FMO09342.5prime Sequence
248 bp (248 high quality bases) assembled on 2010-10-13
> FMO09342.5prime
CAGTCGACATGAGTTTCATTAACGGCTTCAAAAGATTCGCCACAACGACG
GTTGGTCTGATGGCCATCGGTATTGGATCGACTGTTATATTCTACACCAC
CCATCGCCTTGTCATCAAACCCTATCTTCTCGAGAAACGACGCCTGGAAG
CCGAGGCCAGTGCGGAGTACCTCTTCCAGCAGGAGGTTCACTCCCAGATT
GGCGAGTCAAGACCCAAACGGAGCGAATATGCAAGCTTTCTAGACCAT
FMO09342.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:43:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34310-RD | 4306 | CG34310-RD | 3827..4048 | 9..230 | 1110 | 100 | Plus |
| CG34310-RA | 706 | CG34310-RA | 266..487 | 9..230 | 1110 | 100 | Plus |
| CG34310-RC | 4002 | CG34310-RC | 3523..3744 | 9..230 | 1110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6674301..6674522 | 9..230 | 1110 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:43:51 has no hits.
FMO09342.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:19 Download gff for
FMO09342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cup-RB | 3518..3752 | 1..236 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:41:41 Download gff for
FMO09342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cup-RB | 3515..3749 | 1..236 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:02 Download gff for
FMO09342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34310-RC | 3515..3749 | 1..236 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:02 Download gff for
FMO09342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6674296..6674527 | 1..236 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:41:41 Download gff for
FMO09342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6674296..6674527 | 1..236 | 97 | | Plus |
