FMO09365.5prime Sequence
1051 bp (915 high quality bases) assembled on 2010-10-13
> FMO09365.5prime
CAGTCGACATGGATTACAAATTCATTGTTTTCAACGCAGCGAGGGACAAC
AATTTGGCGCAGTTGAAGGCCACCCTTTACAACAAAAGCTCCGTCGAAGT
GGGCAGCCTGATATCGGCGAAAGTGAACGGAGCCACCCCGCTGGTCATCT
CCTGCCGCAATGGCCACTACGACATTGTAGAATACCTATTGACAAAATGT
CGGGCCAACGTGGAGCAGGTGGGATCGGTCAGTTTCGACGGGGAACCAAT
AGAGGATGCCCCACCGCTGTGGTGCGCTGCGGCCGCTGGCCACCTGGGCA
TCGTAAAGATGCTCGTCCGCCGAGGGGCGAATGTGAACAGTACCACCAGG
ACGAATTCCACACCGCTGCGAGCTGCCTGCTTCGATGGACACTACGAGAT
CGTCAAGTACCTGGTACACCATGGAGCAGACTTTGAGGTGGCGAACCGTC
ACGGCCACACCTGCTTGATGATCGCCTGCTACAAGGGTCACTTCCGCATC
GCCCAGTATCTGCTCTCCCTGAACGCCGATGTGAACCGCTGCAGCGTTAA
GGGCAACACGGCACTGCACGACTGCGCCGAGTCGGGCTCCTTGCAGATCC
TCCAGTTGCTGCTCAAGCACGGCGCCACCATGGACGTGGACTATTACGGA
ATGACTCCGCTGCTGGCGGCCAGTGTCACCGGTCACATGCCCATCGTGGA
GCACTTAATCACTTTGCCCTGTGTGAGCAGGGAATCGAGGATTCATGCTT
TGGAACTGCTACGTGCCACGTATGTGGACCGAAAGCGGGACATGGCAGCG
GCACTAAACCTGTGGCGTCGAGCGCTCGAGGAGCGTGCCGTGGAGCCACC
GCTGGAGAAAAATGTTCAGAACCAGTGCCGGCATATGAGATGGGTTTGCG
AGGTAACCAGCGTGGAGGAGCTGGAGGAAATGGTTTTGGATCCTGGATGT
AGATGCGAATGCAAGGCTCTGTTCATTCGGCAGCGGCATTCTCGGACCAC
CCATCCGACACCAGCTACTACATTCGATTTAAGGGCGCCTATAATGCGGA
C
FMO09365.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:45:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6966-RC | 4578 | CG6966-RC | 706..1746 | 9..1051 | 4880 | 98.3 | Plus |
| CG6966-RB | 3445 | CG6966-RB | 706..1746 | 9..1051 | 4880 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:45:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15082302..15082904 | 1031..427 | 2565 | 97.9 | Minus |
| 3R | 32079331 | 3R | 15083119..15083481 | 429..67 | 1815 | 100 | Minus |
| 3R | 32079331 | 3R | 15094866..15094926 | 69..9 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:45:03 has no hits.
FMO09365.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:31 Download gff for
FMO09365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6966-RB | 686..1726 | 9..1051 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:42:18 Download gff for
FMO09365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6966-RB | 686..1726 | 9..1051 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:39 Download gff for
FMO09365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6966-RB | 706..1746 | 9..1051 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:39 Download gff for
FMO09365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15082300..15082901 | 430..1034 | 97 | <- | Minus |
| 3R | 15083119..15083479 | 69..429 | 100 | <- | Minus |
| 3R | 15094867..15094926 | 9..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:42:18 Download gff for
FMO09365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10908022..10908623 | 430..1034 | 97 | <- | Minus |
| arm_3R | 10908841..10909201 | 69..429 | 100 | <- | Minus |
| arm_3R | 10920589..10920648 | 9..68 | 100 | | Minus |
