FMO09369.5prime Sequence
1095 bp (966 high quality bases) assembled on 2010-10-13
> FMO09369.5prime
CAGTCGACATGGACGAGCTGCAGAAGTTGGAGTACCTTTCGCTGGTCTCG
AAGATTTGCACTGAGCTAGACAACCACTTGGGCATCAACGACAAGGACCT
GGCCGAGTTTATCATCGATTTAGAAAACAAAAATCGCACATATGACACAT
TTCGCAAGGCTTTGCTGGATAATGGCGCCGAATTCCCAGACTCCCTGGTC
CAGAACCTGCAGCGCATCATTAATCTTATGCGCCCCAGCAGACCTGGCGG
CGCTAGCCAGGAGAAAACTGTCGGCGACAAGAAGGAAGACAAGAAATCGC
AACTTTTGAAAATGTTTCCCGGCCTCGCTTTGCCCAATGACACCTACAGC
AAAAAGGAGGAGAGCGATGACGATGAGAAGGTGAAGGCGAAACCGGAGAA
GCATTCCGAAACGCACAAAAAAACCGATATGAGCTATGTGGATGCAGCTA
TGATGGAGCTGGAAGCGCTGGCCCCTGGCGAGGGTGCCACATTGGTAAGA
CCACACAAAGAAGTCAGTTCCAGGGACCGCCACAAGCGCCGAAGTAGGGA
TCGAGACACAAAAAGAAGAAGTAGGTCGCGGGAGGATAGGCACTCTGATC
GCCGCAGAAGCAGATCGCGTGACAAGGAACGCCGTCGTCGCAGCAGATCC
CGAGACAATCGCCGCAGAAGCAGGTCTCGCGAGGATCGCGATCGTGACAG
AGATCGACGCCACAAGAGTTCCAGCTCAAGAGATCACCACGAACGCCGAA
GACGAAGCCGATCTCGTTCCACAGAACGGAGAGATAGGAGAGATCGTTCG
AGGGACTGCAGTGAAAAGATGCCCCCACCATCTGCCGCCATGACCGATGA
TCCGGAGGCGGGCAAGATCTATTCCGGCAAGATAGCTAATATTGTACCCT
TTGGTTGCTTCGTACAGCTTTTTGGACTGCGGAACGCTGGGAAGGCTTAG
TACACATTTCACACTAAAAGCAGAAGGACGCGTGACAGATGTAACGGAGG
TAGTCACTCGGAATCAGACTGTTAAAGTGAAAGTATTGTCATTACTGGTC
AAAAGTGTCCTTTGTCGATGGAAAGAGGTGGATCAGACTCTGAGG
FMO09369.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:45:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pea-RA | 3898 | CG8241-RA | 96..1183 | 8..1092 | 5200 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:45:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14153248..14154328 | 8..1086 | 5045 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:45:15 has no hits.
FMO09369.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:32 Download gff for
FMO09369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pea-RA | 86..1181 | 1..1095 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:42:26 Download gff for
FMO09369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pea-RA | 89..1184 | 1..1095 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:44 Download gff for
FMO09369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pea-RA | 89..1184 | 1..1095 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:44 Download gff for
FMO09369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14153241..14154336 | 1..1095 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:42:26 Download gff for
FMO09369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10040746..10041841 | 1..1095 | 98 | | Plus |
