FMO09371.5prime Sequence
1072 bp (936 high quality bases) assembled on 2010-10-13
> FMO09371.5prime
CAGTCGACATGACTTTTACGTATAAGGAACTCATAGATGTTGCCATTGGG
TCCCCGGAATCAGGACACGTTAACTTTTACGCTTTGCATGTCCTGCTCAC
GTGCTTTGCCCAGCGATTGGAGGTCCTCGATGAGGTTGTCGAGCAGGAAG
ACTATATGGTGGCCAATGTGCGCTTGCAAAGCAGTTTACTGACCTTGGGT
AACACCTCGAAGTTCCGTCTTTTCGCCGGTGCGGATGCCGAGGAGGGAGC
AGCAGCCGAGCCGGCGGCAGAGCCCCCAGCCGAGGAGGCAGAGGCACCCC
CTGCGCCAGTCGAAGAGCCTCCCGCAGCGGATCCAGCACCAGAGCCTGCT
CCAGAACCTGCTCCAGAGCCTGCTGCAGAGGAACCTGCCCCAGCGGAGCC
AGTCCCAGAAGAAGCAGCTCCTGCGGAGGCTGCTGCATCATCTCCAGAAC
CAGTGGGTTCCAACCATGAACCAACTCCATCTGCAACTCCGGCTCCCGAG
GAACATCCTCCTTCTGAGCCCGAGGCAGATACCTCAAAAGCACCAATGGA
TGTGCCTGCCGAGGCCAAGGGAGAGGAGCTGGCACCGCAGGCCTCACGGG
TCTCCTCGAGATCCTCCGGTCGCGACAAGTCGCACAGTCAAACGGACGGA
TCTCTTACCAATAATCTCTTGCGTCTCGAAAGACGCCTCTCCAAGATTGA
ACTGCAGAAGGAACAGGCCACAATGGAGGTTCAGCAGTTTGTGAGCAATC
TCACCAGCCAGCTGAAGATCACGATGGAGCACGTGAACAATATGACCCAC
TTGTTGATCGATCGCAAGCCGAACCCGCAGAGGTTTCGGTTACTCCGTCA
CATAGCCAGCAGTTGATGGTCCTGATGGTGACGACTGGTGATGAGTTTCT
GTGAGTTGGTCGAGTGGGGATATAGTGGACGTGTCGAAGAGGAGGGTCTG
TCCGAGGAGGAGTCCCAGTGGAGTTCTAGTGCGCCCACGGAGGTGGAGAA
GCCTGAGAAGAGGAGAACTTGAATGGAACAGCCCCTTGCATTCCCGGAAA
AATGCTACTGACTCTAACTCAG
FMO09371.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:44:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10869-RA | 2227 | CG10869-RA | 120..1187 | 5..1061 | 4915 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:44:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1585935..1586788 | 1037..190 | 3785 | 98.4 | Minus |
2L | 23513712 | 2L | 1586852..1587036 | 189..5 | 910 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:44:39 has no hits.
FMO09371.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:27 Download gff for
FMO09371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10869-RA | 118..1187 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:42:06 Download gff for
FMO09371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10869-RA | 118..1187 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:26 Download gff for
FMO09371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10869-RA | 118..1187 | 1..1061 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:26 Download gff for
FMO09371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1586852..1587038 | 1..189 | 98 | | Minus |
2L | 1585906..1586788 | 190..1061 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:42:06 Download gff for
FMO09371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1585906..1586788 | 190..1061 | 97 | <- | Minus |
arm_2L | 1586852..1587038 | 1..189 | 98 | | Minus |