FMO09379.5prime Sequence
388 bp (388 high quality bases) assembled on 2010-10-13
> FMO09379.5prime
CAGTCGACATGGATGAGCAGCATCAGAACCTCAATCAAAATGGCAGCGAA
TCCAATGGTAAGCAGGCCAGGATCGTTTCGGGACTTGATCGTCTGCTGAA
GACTCCTCCGCCTGGCGAACAGACAAGAGCAGTGCGGCGACAAGTGATCG
CTGTTATCCTGGCCAACGTGGGTGTCTTCTCAACGGGAATGACCCTGGCC
ATGCCCACCGCCACTCTGCATCAGCTGAAGGACACCACGGAGCCAGTGCA
TCTGAACGATTCGCAGGCTTCCTGGTTCGCATCGGTAAACGCTCTGTCCG
CTCCTATAGGCGGCTTGCTGTCCGGTTTCTTGCTTGACAGGATTGGAAGG
AAGAAATCCCTGATAGTGCTCAATGTACTGATTATTCT
FMO09379.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:45:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8249-RC | 3283 | CG8249-RC | 260..639 | 9..388 | 1900 | 100 | Plus |
| CG8249-RB | 2094 | CG8249-RB | 409..788 | 9..388 | 1900 | 100 | Plus |
| CG8249-RA | 1945 | CG8249-RA | 260..639 | 9..388 | 1900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:45:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15845767..15846146 | 388..9 | 1900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:45:41 has no hits.
FMO09379.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:36 Download gff for
FMO09379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8249-RA | 258..637 | 9..388 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:42:37 Download gff for
FMO09379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8249-RA | 260..639 | 9..388 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:56 Download gff for
FMO09379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8249-RA | 260..639 | 9..388 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:56 Download gff for
FMO09379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15845767..15846146 | 9..388 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:42:37 Download gff for
FMO09379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11733272..11733651 | 9..388 | 100 | | Minus |
