FMO09386.5prime Sequence
1064 bp (918 high quality bases) assembled on 2010-10-13
> FMO09386.5prime
CAGTCGACATGTACAAGCACACGGTCAAGTCCAAGTTGAGCCAGGTGCGC
AGTAACCCGCCACCCCCTGCCGCTGCCTCGCCAACAACACACAAACATGG
ATTGGGGGCAGGCAAGAAGTTCTTCTCCAATATACGCCACAAAATCGAGG
ATAATTTGACGCCCAAGTTGAGTGGAAAACTATATTACAAAGGCAGCAAG
CACACCAGATCCATGAGTGCACTCTGCACGGTGGATGGCGGATGTGTGGG
TGGGAAGTATACGCCGAAGGTTGTGCCCACAAGTCCCGTACCACTTCAAA
TGCCCAGCCAGATGAGCAGCAGTGTGTGCAGCTATGTGGACAGCGATGAG
GAAAGTCACCTGAGCCTGAGTCTCAATTTGGCGCAGCAGTCGCTCGAGGA
TGAGATCTTCGCAGAGCTAGAGAAGGTGGCACACGATGTTAGTAAACTGA
ACGAGGTGCTTCAAAGCTTTGACCAGATACTAAACGAGTATCCACCTTTG
GAGGGAATTATATTAGCTCCTCAAGAGGAGCTGCCCGCTCCACCGGCGGA
GTTCAGCGATCGCCAGCCAATGTTGTCAAAGTCACACAGTACTCTAAGCA
TGGGCAGGACTAGGATGCAGGTGTACCAGTCCCCGGAATTGGCGGGATCT
GTGTTGCTACTACGCGGAGCCGGAGGCGATTCCAGATACAACTCCCTGAG
TGATCTTAGCGGCAGCAGGATACCGGTACGCAACAATCGAGTCTGCGCAA
GCGCAGCGAAAGTTTTTGCCTCGAGCAACCGGTTTGCTCCAGGACATCCA
GTATGCAGCGCACTCGGTCCATGCTGACCCTTAATACAGCTGCACCTGTA
GATCAATCATTCCGAATGCTGTAGCCATGCCGAAGCGAGCAAACTCCAGC
CTCGAAAAGAGACCCATAACTTCCCAGACCAGCGGCCAGAGAGCAAACTC
CACCCTGAAACCGGTTGGGATAAAGCCAAAATCGCTCCAATGCTACAGCG
ATGAACTGCTCGTTGAATGTTTGTCCAAAGAACAGGAGATCTGCGTCCTG
GTGGAAGCATGATG
FMO09386.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:46:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32855-RA | 2013 | CG32855-RA | 208..1264 | 9..1062 | 4850 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:46:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16079751..16080785 | 1041..9 | 4680 | 97.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:46:09 has no hits.
FMO09386.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:40 Download gff for
FMO09386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32855-RA | 209..1271 | 1..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:42:51 Download gff for
FMO09386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32855-RA | 209..1271 | 1..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:07 Download gff for
FMO09386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32855-RA | 203..1265 | 1..1064 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:07 Download gff for
FMO09386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16079726..16080789 | 1..1064 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:42:51 Download gff for
FMO09386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11905448..11906511 | 1..1064 | 97 | | Minus |
