FMO09388.5prime Sequence
1093 bp (992 high quality bases) assembled on 2010-10-13
> FMO09388.5prime
CAGTCGACATGCGGCTGTTAGTGCTCTACGGGAGTCAAACCGGCACCGCC
CAGGATGTGGCGGAACAGATCTGGCGGGAGTCGCATCAACTGGGCTTCCA
AGGACCCGTGCTGCCTTTCGACGAGTACGATATGACCAAACTTATTGAGG
AGCGCCTCGTGGTCTTTGTGGTGGCCACTACGGGTGACGGAGTGGAGCCG
GATAACATGAAGCTGGCCTGGCGATTTCTCCTGAAGCGCAGCTTACCCGC
CCAATCCTTGCAAGGCATGCAGTTCGCGTGCCTTGGACTCGGGGACTCCA
GCTATCCGAAGTTTAACTATGCCGCCAAGAAACTGAGCAAGAGACTACAG
AATCTGGGAGCAAATAGCGTGTGTCCAGTGGGTCTGTGTGATGATCAGCA
TGACTACGGGCATTTGGGTGTATCCCTTAGCTGGACAAAGGATTTGTGGA
CAGCTCTGAAAGGCATCTCTGGTCTTGACGAAAGTAAACTTAGCAACAGC
CACCAAACTACTGTAAAGTGGTCAGTAAAGGAGCTGCCTAAGGATTCCCA
AATTGCTCCGATGGACAATCTGCTCTGGAGCCAAAAACAAACTGCCCACT
CTTTCAAAATTCTGGATAACCAAAGAACAACGGCGGTGGATCACTTTCAG
GATGTACGCTTCCTAAGGCTGCAGTGTCAGACTGAAGATCTTAGCTGGGA
ACCCGGCGATGTACTCGATGTTCAGCCGCAAAACAGCGATGAAGCTGTCC
AAACATTCTTCGACCTTATTCGCGAACACAGCCTGAACTTCGATGAGAGC
ACTATAGTGGAGGTATCCAGTGCACATCATGATATGCCCCTTCCCATAGC
CTATTCCAATCCCTTAAGCCTCCTCCAGGCCGCCAAATTCGTTTGGGACT
TGAGTGCTAAGCCACGGCAACGTTTCCTCGAGGTACTAGCACAGAATTGC
TGCGATGAAATGGAAAAGGAAAAGCTGCTCGAATTCTCCCTCCGCCGGAG
GGAATTGATGACTTAATGGCTTATGTGAACAGCCCCGTCGTAATTCTTTG
GAGGTTCTGGAGAATTCCGGCCACGCCCACCCCCTTGCTACTC
FMO09388.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:46:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13667-RB | 1846 | CG13667-RB | 32..1099 | 9..1077 | 5140 | 99 | Plus |
| CG13667-RA | 1880 | CG13667-RA | 66..1133 | 9..1077 | 5140 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:46:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8405540..8406607 | 9..1077 | 5065 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:46:16 has no hits.
FMO09388.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:41 Download gff for
FMO09388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13667-RB | 32..1102 | 9..1081 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:42:56 Download gff for
FMO09388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13667-RA | 59..1136 | 3..1081 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:11 Download gff for
FMO09388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13667-RA | 59..1136 | 3..1081 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:11 Download gff for
FMO09388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8405533..8406601 | 3..1070 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:42:56 Download gff for
FMO09388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8398633..8399701 | 3..1070 | 98 | <- | Plus |
