FMO09393.5prime Sequence
1104 bp (943 high quality bases) assembled on 2010-10-13
> FMO09393.5prime
CAGTCGACATGAGAGCTACCAGAAGCGCTTGGTTGGGCTTTCTGCTCGAG
CTGCTACTCCTCTTTGAAATCCAACTTTGCGATGTGACTGAAGCCCGACA
AAACCATATGAATCGCATGCAGATGAGTGGAAACTTTCCAGACTCACGTG
AGGAGCAACTGGTGCGCCAAAAAATAGCTACAGATGTGCAAAAGTATATG
AACCTGAGCGCCGATCCCTGTACGGATTTCTTCGAGTATGCCTGCGGTCA
GTGGGGCCGTTATCACAAGCGACAGCTTCGTCCGGATGAGTTGTCCACTG
CCCAGCAACTGATGGAGACCAAAATTTCGGAGCAACTGCAGCAGCTTCTC
ACCCAGCCACTGCCGCCGCAACATCATCCGAACGGATATAGTGGAGCCAG
CATGACGAATGTTCGAAAAGTGCGAGCCTTCTACGAATCTTGCGTCGCAG
TGGAAGCAAATGCCAGTGAGAGACGTCGTTTCCTAATGAAGATTCTCAAG
GATAACGGAGGATTACGCAACGTTCCCAACTCCAACTGGCAGCACAATCG
TCAGTGGGTACAAACACTGGGCGAACTGAGAAGGAACTACGGATTGGACA
TACTTTTGGGTCTGGAAATCGATCTGAATCTGCAAACCATGAAGGGTAAT
ACCATATACTTTGGTGAGCCCAAGCTCACCATCATTCCAGCTGAGCACTG
CAATGCCTTGGCAACGCGAGGAGCTCAAGTGCGAGATGAGGTCTACGAGC
TGGTGCAGCAGCACGTGACCGAGAATTTGCGCGATTGGTTTGGCATGGAC
ACCGGAGAGGCGGCTAGATTTGCAGAGATATTATTCGTTTCGAGTTTGAG
CTGTGCAAACAAATGGGAGAGCAGGATATTCAGAAGCCAGAGAGGAGTTT
CCACCCGCCATACAGCGCAAATTTACCGCGCCCCGATCGCGAACTGGTCA
GAGCGTCTGCGGGGCCAGAAAGGAGAATGACCCTGACCGAGCCCACCAGC
GAGAATGGTAAATCCACTTGAACTTTAAAATGCTGGTGAAGTCCTCCTTG
GAGAGTCAGTACCCATCCAAGTCTATCTTCGTCTCCGAAAATGTAAACAT
GGTG
FMO09393.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:46:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4725-RA | 2267 | CG4725-RA | 6..1104 | 9..1101 | 5015 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:46:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22759995..22761071 | 1082..9 | 4740 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:46:29 has no hits.
FMO09393.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:43 Download gff for
FMO09393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4725-RA | 1..1101 | 9..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:43:01 Download gff for
FMO09393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4725-RA | 1..1101 | 9..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:17 Download gff for
FMO09393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4725-RA | 2..1106 | 5..1104 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:17 Download gff for
FMO09393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22759971..22761078 | 1..1104 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:43:01 Download gff for
FMO09393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18585693..18586800 | 1..1104 | 97 | | Minus |
