FMO09402.5prime Sequence
1115 bp (992 high quality bases) assembled on 2010-10-13
> FMO09402.5prime
CAGTCGACATGGATCCGCAGAAGATCACCGAGCTGGCTAACCTGCTACGG
CAGAACGGCGACAAAATATTGAGCTCCGAATTTACCTTGACGTTATCAGG
TTCCCTGCTGCGTGCGCTAAACGACTCCTTCACCCTGATCGCGGACACTG
AAATCGGAACTGGCGCGGGTTACCTCCAGCCGCAGTCTTTTCAGGTGGTC
AAGCCCATCAACGCCAAGTCCAGCGTCTTCCCCGACCTCCAGCTTGTCCA
TGACTTTGTGCAGAAAACGACGCTTTTGAAGCTGACCTACTTTCCCAGCG
AACACTATTTTGAGGGCGCCATCGACATAGCGAAGTTTCGAGCACTGCGC
CGCCTCGAGGTAAACAAAATCAACATCGGCCAAGTTGTGGGCATCCAACC
GCTGCGCGGCCAGCTGCAACATTTGATCTGCGTAAAAAGCCTTACCAGCG
TGGACGACATTATCACGCGCTGCGGCGGCGACAACTCGAATGGCTTTGTG
TGGAACGAGCTAAAGACGGCCGATTTCAGCTACAACAGCCTGCGCAGTGT
AGATACCGCCCTGGAGTTCGCACAGCACCTGCAACACCTAAACCTTCGGC
ACAATAAGCTCACCAGCGTGGCCGCCATCAAATGGCTTCCGCATCTTAAG
ACCCTGGACCTGAGCTACAACTGCCTTACACACCTTCCACAGTTTCACAT
GGAGGCCTGCAAGCGACTACAGCTATTGAACATCAGCAACAACTACGTAG
AGGAGCTTCTGGACGTGGCAAAGCTGGACGCTCTGTACAACCTGGATCTG
TCCGACAACTGCCTGTTGGAGCACTCGCAGTTGCTGCCACTGAGTGCCCT
GATGAGCCTGATTGTACTAAATCTGCAAGGAAATCCCCTTGCTTGCAATC
CCAAACATCGCCAGGCGACTGCACAGTACTTGCCACAAGAACCCCCGCAA
CTGTGAAGTTGTCTTGGACTTTGAGCCGCTGACTAAAGGCGGAGAAGCCG
CTGACGGGCAGCCAAAAGTGCGCTACATTAGCGGGCTTAGCCACCGCTCG
CCCAGGAGTACCTCATGTTCCATCAACAGCTCTAGTGCTTCCAATAAAAC
AGCGAACGTTCAGTT
FMO09402.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:34:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9044-RC | 4425 | CG9044-RC | 234..1318 | 8..1093 | 5225 | 99.1 | Plus |
| CG9044-RB | 4356 | CG9044-RB | 234..1318 | 8..1093 | 5225 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:34:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5950122..5951117 | 97..1093 | 4640 | 98.8 | Plus |
| 2L | 23513712 | 2L | 5949899..5949992 | 8..101 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:34:55 has no hits.
FMO09402.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:58:55 Download gff for
FMO09402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9044-RB | 193..1299 | 1..1108 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:37:08 Download gff for
FMO09402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9044-RB | 227..1333 | 1..1108 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:49 Download gff for
FMO09402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9044-RB | 227..1333 | 1..1108 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:49 Download gff for
FMO09402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5949892..5949990 | 1..99 | 97 | -> | Plus |
| 2L | 5950125..5951132 | 100..1108 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:37:08 Download gff for
FMO09402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5949892..5949990 | 1..99 | 97 | -> | Plus |
| arm_2L | 5950125..5951132 | 100..1108 | 98 | | Plus |
