FMO09404.5prime Sequence
1131 bp (1037 high quality bases) assembled on 2010-10-13
> FMO09404.5prime
CAGTCGACATGGAGGAAATCAAGAAGTTTGACAAGCTTGCCTTCCTGGAA
AGCTACCTGCTGAAGCACAAGGAATTGGGCAAGCGACAGCGCGAGTACAA
GAAGATCCTGTCCAGCAAACTCAAGACCCGCAAGGAGACCATCATCGAGG
CCAGCTTTGAGACGGCCATCGATCAGCTGGAGGAGGAGAAAAACGATCTG
CGTGCCCAGATCTGGGTGGCCAGTGGTACGACCCACAAAAAACAGAACAA
TCGCTGGCTGGAGCTGATTCGCTGCCATGTCGAGTGCCAGGAGAATCTGT
CGCAGGACATTAACTCTCTGAAGACATCGATTTCCAACATGGAGAAGGAG
ATAAGTCGCATGTCCAAGCAAATATACAACCTGAATCGTTTAACCATTCC
GGATCAGCAACATCAGGCCTATGTAATGCGAGCACGGAAAAGGATGACCA
TTTTGGAGAATTCCCTGGAGGTGGGAGTGCGTCAGGAGTGCGGTTTTACG
GCAGCCAATGCGGATCTGCGAGAGCAGCTTATCCGCATCCTGAATCATCG
CACCTTCTTCAATGATTCATACACCAAAATGGTGCAGAAGCTGAACAGCG
AGAAAAAGTATCTCATAGATCTGATCGAATACGCTCTGAATACCTTCGAT
GGCTGCATTGAGGTGTACGAGAAAATTGATTTGTTGGCCAAAAGGGAGGC
CAAGGAGCGCGATATGAGACGTGTGGAGATGCAGGGTATTATGCGAAAGG
TGGCAGCCGATGGTGATAACACCGCCTTCCTGAATTGCAAGTCTAAGCCT
CGAGAGCTGGCCGATTTGCAGCCCAAGGAGTACAAGCGAAAGGGATGAAT
TCCGACGGGTGCACAACAAAAAGATCAATCTCTACAACTCGGTGCTGCAG
AAGATTCTCCAGTATACGGAATCTAGCATATGGACGAGGTGATCGATAAG
GTTTCAGCAGCAAGAGAGTCTCTATTACTCGTTCTTCAACTATGCCAACG
AATGAGCTACCACATACTATGCTGAATAATTCGGTGAATCGCCTGTTGAG
AATTAGCTACTTGAAAAAGGATACTCACGCTGCATGACACTGAATCGAAT
TCCAGTCTGGAAACAGGGTGCGTACAACTGG
FMO09404.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:35:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17083-RA | 1959 | CG17083-RA | 159..1288 | 8..1124 | 5155 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:35:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23286853..23287893 | 1047..8 | 4950 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:35:02 has no hits.
FMO09404.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:58:56 Download gff for
FMO09404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17083-RA | 152..1297 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:37:11 Download gff for
FMO09404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17083-RA | 152..1297 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:53 Download gff for
FMO09404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17083-RA | 152..1297 | 1..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:53 Download gff for
FMO09404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23286755..23287900 | 1..1131 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:37:11 Download gff for
FMO09404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19112477..19113622 | 1..1131 | 97 | | Minus |
